Literature DB >> 18424047

Sticking together? Falling apart? Exploring the dynamics of the interactome.

Marc R Wilkins1, Sarah K Kummerfeld.   

Abstract

Advances in techniques for the study of protein-protein interactions have dramatically improved our understanding of the interactome. However, we know little about the dynamics of this complex system. To better understand the dynamics of the interactome, it is important to consider what happens when single proteins are perturbed. Changes in protein abundance and post-translational modification can function as switches in the interactome, affecting protein-complex assembly and function. Changes in protein sequence or a dramatic increase in abundance might cause a promiscuous gain of interactions. These effects are not identical for all proteins and will differ depending on the number and type of interaction partners that a protein has.

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Year:  2008        PMID: 18424047     DOI: 10.1016/j.tibs.2008.03.001

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  11 in total

1.  Dengue-2 structural proteins associate with human proteins to produce a coagulation and innate immune response biased interactome.

Authors:  Brenda B Folly; Almeriane M Weffort-Santos; C G Fathman; Luis R B Soares
Journal:  BMC Infect Dis       Date:  2011-01-31       Impact factor: 3.090

2.  Expanding the proteome: disordered and alternatively folded proteins.

Authors:  H Jane Dyson
Journal:  Q Rev Biophys       Date:  2011-07-01       Impact factor: 5.318

3.  Mapping protein-protein proximity in the purinosome.

Authors:  Yijun Deng; Jongsik Gam; Jarrod B French; Hong Zhao; Songon An; Stephen J Benkovic
Journal:  J Biol Chem       Date:  2012-09-06       Impact factor: 5.157

4.  Revisiting date and party hubs: novel approaches to role assignment in protein interaction networks.

Authors:  Sumeet Agarwal; Charlotte M Deane; Mason A Porter; Nick S Jones
Journal:  PLoS Comput Biol       Date:  2010-06-17       Impact factor: 4.475

Review 5.  Mammalian two-hybrids come of age.

Authors:  Sam Lievens; Irma Lemmens; Jan Tavernier
Journal:  Trends Biochem Sci       Date:  2009-09-26       Impact factor: 13.807

6.  Proteomic identification of Hsc70 as a mediator of RGS9-2 degradation by in vivo interactome analysis.

Authors:  Ekaterina Posokhova; Vladimir Uversky; Kirill A Martemyanov
Journal:  J Proteome Res       Date:  2010-03-05       Impact factor: 4.466

7.  Interactions affected by arginine methylation in the yeast protein-protein interaction network.

Authors:  Melissa A Erce; Dhanushi Abeygunawardena; Jason K K Low; Gene Hart-Smith; Marc R Wilkins
Journal:  Mol Cell Proteomics       Date:  2013-08-05       Impact factor: 5.911

8.  The protein interaction map of bacteriophage lambda.

Authors:  Seesandra V Rajagopala; Sherwood Casjens; Peter Uetz
Journal:  BMC Microbiol       Date:  2011-09-26       Impact factor: 3.605

9.  Dynamic NF-κB and E2F interactions control the priority and timing of inflammatory signalling and cell proliferation.

Authors:  John M Ankers; Raheela Awais; Nicholas A Jones; James Boyd; Sheila Ryan; Antony D Adamson; Claire V Harper; Lloyd Bridge; David G Spiller; Dean A Jackson; Pawel Paszek; Violaine Sée; Michael Rh White
Journal:  Elife       Date:  2016-05-17       Impact factor: 8.140

10.  Dynamic hubs show competitive and static hubs non-competitive regulation of their interaction partners.

Authors:  Apurv Goel; Marc R Wilkins
Journal:  PLoS One       Date:  2012-10-31       Impact factor: 3.240

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