Literature DB >> 18422347

The ability of actinic light to modify the bacteriorhodopsin photocycle revisited: heterogeneity vs photocooperativity.

Richard W Hendler1, Richard I Shrager, Curtis W Meuse.   

Abstract

In 1995, evidence both for photocooperativity and for heterogeneity as possible explanations for the ability of actinic light to modify the kinetics and pathways of the bacteriorhodopsin (BR) photocycle was reviewed ( Shrager, R. I., Hendler, R. W., and Bose, S. (1995) Eur. J. Biochem. 229, 589-595 ). Because both concepts could be successfully modeled to experimental data and there was suggestive published evidence for both, it was concluded that both photocooperativity and heterogeneity may be involved in the adaptation of the BR photocycle to different levels of actinic light. Since that time, more information has become available and it seemed appropriate to revisit the original question. In addition to the traditional models based on all intermediates in strict linear sequences, we have considered both homogeneous and heterogeneous models with branches. It is concluded that an explanation based on heterogeneity is more likely to be the true basis for the variation of the properties of the photocycle caused by changes in actinic light intensity. On the basis of new information presented here, it seems that a heterogeneous branched model is more likely than one with separate linear sequences.

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Year:  2008        PMID: 18422347      PMCID: PMC2672163          DOI: 10.1021/bi701749y

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  16 in total

1.  Time-resolved step-scan Fourier transform infrared spectroscopy reveals differences between early and late M intermediates of bacteriorhodopsin.

Authors:  C Rödig; I Chizhov; O Weidlich; F Siebert
Journal:  Biophys J       Date:  1999-05       Impact factor: 4.033

Review 2.  Proton transfers in the bacteriorhodopsin photocycle.

Authors:  Janos K Lanyi
Journal:  Biochim Biophys Acta       Date:  2005-12-09

3.  An apparent general solution for the kinetic models of the bacteriorhodopsin photocycles.

Authors:  Richard W Hendler
Journal:  J Phys Chem B       Date:  2005-09-01       Impact factor: 2.991

4.  Control of the integral membrane proton pump, bacteriorhodopsin, by purple membrane lipids of Halobacterium halobium.

Authors:  A K Mukhopadhyay; S Dracheva; S Bose; R W Hendler
Journal:  Biochemistry       Date:  1996-07-16       Impact factor: 3.162

5.  Spectrally silent transitions in the bacteriorhodopsin photocycle.

Authors:  I Chizhov; D S Chernavskii; M Engelhard; K H Mueller; B V Zubov; B Hess
Journal:  Biophys J       Date:  1996-11       Impact factor: 4.033

Review 6.  The ability of actinic light to modify the bacteriorhodopsin photocycle. Heterogeneity and/or photocooperativity?

Authors:  R I Shrager; R W Hendler; S Bose
Journal:  Eur J Biochem       Date:  1995-05-01

7.  Dimeric-like kinetic cooperativity of the bacteriorhodopsin molecules in purple membranes.

Authors:  Z Tokaji
Journal:  Biophys J       Date:  1993-09       Impact factor: 4.033

Review 8.  Deconvolutions based on singular value decomposition and the pseudoinverse: a guide for beginners.

Authors:  R W Hendler; R I Shrager
Journal:  J Biochem Biophys Methods       Date:  1994-01

9.  Water structural changes in the L and M photocycle intermediates of bacteriorhodopsin as revealed by time-resolved step-scan Fourier transform infrared (FTIR) spectroscopy.

Authors:  Joel E Morgan; Ahmet S Vakkasoglu; Robert B Gennis; Akio Maeda
Journal:  Biochemistry       Date:  2007-02-15       Impact factor: 3.162

10.  Interconversions among four M-intermediates in the bacteriorhodopsin photocycle.

Authors:  Richard W Hendler; Salil Bose
Journal:  Eur J Biochem       Date:  2003-09
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  3 in total

1.  Electrogenic proton-pumping capabilities of the m-fast and m-slow photocycles of bacteriorhodopsin.

Authors:  Richard W Hendler; Curtis W Meuse
Journal:  Biochemistry       Date:  2008-04-19       Impact factor: 3.162

2.  Infrared and visible absolute and difference spectra of bacteriorhodopsin photocycle intermediates.

Authors:  Richard W Hendler; Curtis W Meuse; Mark S Braiman; Paul D Smith; John W Kakareka
Journal:  Appl Spectrosc       Date:  2011-09       Impact factor: 2.388

3.  Single molecule kinetics of bacteriorhodopsin by HS-AFM.

Authors:  Alma P Perrino; Atsushi Miyagi; Simon Scheuring
Journal:  Nat Commun       Date:  2021-12-10       Impact factor: 14.919

  3 in total

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