Literature DB >> 18421594

Beta-D-xylosidase from Selenomonas ruminantium: catalyzed reactions with natural and artificial substrates.

Douglas B Jordan1.   

Abstract

Catalytically efficient beta-D-xylosidase from Selenomonas ruminantium (SXA) exhibits pK (a)s 5 and 7 (assigned to catalytic base, D14, and catalytic acid, E186) for k (cat)/K (m) with substrates 1,4-beta-D-xylobiose (X2) and 1,4-beta-D-xylotriose (X3). Catalytically inactive, dianionic SXA (D14(-)E186(-)) has threefold lower affinity than catalytically active, monoanionic SXA (D14(-)E186(H)) for X2 and X3, whereas D14(-)E186(-) has twofold higher affinity than D14(-)E186(H) for 4-nitrophenyl-beta-D-xylopyranoside (4NPX), and D14(-)E186(-) has no affinity for 4-nitrophenyl-alpha-L-arabinofuranoside. Anomeric isomers, alpha-D-xylose and beta-D-xylose, have similar affinity for SXA. 4-Nitrophenol competitively inhibits SXA-catalyzed hydrolysis of 4NPX. SXA steady-state kinetic parameters account for complete progress curves of SXA-catalyzed hydrolysis reactions.

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Year:  2007        PMID: 18421594     DOI: 10.1007/s12010-007-8064-4

Source DB:  PubMed          Journal:  Appl Biochem Biotechnol        ISSN: 0273-2289            Impact factor:   2.926


  7 in total

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2.  Purification and characterization of a recombinant β-D-xylosidase from Thermobifida fusca TM51.

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Journal:  Protein J       Date:  2012-12       Impact factor: 2.371

3.  Expression and characterization of fifteen Rhizopus oryzae 99-880 polygalacturonase enzymes in Pichia pastoris.

Authors:  Jeffrey A Mertens; Michael J Bowman
Journal:  Curr Microbiol       Date:  2010-12-15       Impact factor: 2.188

4.  Introducing endo-xylanase activity into an exo-acting arabinofuranosidase that targets side chains.

Authors:  Lauren S McKee; Maria J Peña; Artur Rogowski; Adam Jackson; Richard J Lewis; William S York; Kristian B R M Krogh; Anders Viksø-Nielsen; Michael Skjøt; Harry J Gilbert; Jon Marles-Wright
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-06       Impact factor: 11.205

5.  Engineering lower inhibitor affinities in β-D-xylosidase of Selenomonas ruminantium by site-directed mutagenesis of Trp145.

Authors:  Douglas B Jordan; Kurt Wagschal; Zhanmin Fan; Ling Yuan; Jay D Braker; Chamroeun Heng
Journal:  J Ind Microbiol Biotechnol       Date:  2011-04-29       Impact factor: 3.346

6.  Extracellular hemicellulolytic enzymes from the maize endophyte Acremonium zeae.

Authors:  Kenneth M Bischoff; Donald T Wicklow; Douglas B Jordan; Sebastiao T de Rezende; Siqing Liu; Stephen R Hughes; Joseph O Rich
Journal:  Curr Microbiol       Date:  2009-01-31       Impact factor: 2.188

7.  Expression and Characterization of Hyperthermostable Exo-polygalacturonase TtGH28 from Thermotoga thermophilus.

Authors:  Kurt Wagschal; J Rose Stoller; Victor J Chan; Charles C Lee; Arabela A Grigorescu; Douglas B Jordan
Journal:  Mol Biotechnol       Date:  2016-07       Impact factor: 2.695

  7 in total

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