Literature DB >> 18419897

Image processing techniques for identifying Mycobacterium tuberculosis in Ziehl-Neelsen stains.

P Sadaphal1, J Rao, G W Comstock, M F Beg.   

Abstract

Worldwide, laboratory technicians tediously read sputum smears for tuberculosis (TB) diagnosis. We demonstrate proof of principle of an innovative computational algorithm that successfully recognizes Ziehl-Neelsen (ZN) stained acid-fast bacilli (AFB) in digital images. Automated, multi-stage, color-based Bayesian segmentation identified possible 'TB objects', removed artifacts by shape comparison and color-labeled objects as 'definite', 'possible' or 'non-TB', bypassing photomicrographic calibration. Superimposed AFB clusters, extreme stain variation and low depth of field were challenges. Our novel method facilitates electronic diagnosis of TB, permitting wider application in developing countries where fluorescent microscopy is currently inaccessible and unaffordable. We plan refinement and validation in the future.

Entities:  

Mesh:

Year:  2008        PMID: 18419897      PMCID: PMC4858347     

Source DB:  PubMed          Journal:  Int J Tuberc Lung Dis        ISSN: 1027-3719            Impact factor:   2.373


  2 in total

1.  The importance of quality control of sputum smear microscopy: the effect of reading errors on treatment decisions and outcomes.

Authors:  T N Nguyen; C D Wells; N J Binkin; D L Pham; V C Nguyen
Journal:  Int J Tuberc Lung Dis       Date:  1999-06       Impact factor: 2.373

2.  Automated identification of tubercle bacilli in sputum. A preliminary investigation.

Authors:  K Veropoulos; G Learmonth; C Campbell; B Knight; J Simpson
Journal:  Anal Quant Cytol Histol       Date:  1999-08       Impact factor: 0.302

  2 in total
  13 in total

Review 1.  A Review of Automatic Methods Based on Image Processing Techniques for Tuberculosis Detection from Microscopic Sputum Smear Images.

Authors:  Rani Oomman Panicker; Biju Soman; Gagan Saini; Jeny Rajan
Journal:  J Med Syst       Date:  2015-10-30       Impact factor: 4.460

2.  Automated bacterial identification by angle resolved dark-field imaging.

Authors:  Benjamin K Wilson; Genevieve D Vigil
Journal:  Biomed Opt Express       Date:  2013-08-20       Impact factor: 3.732

Review 3.  Clinical microbiology informatics.

Authors:  Daniel D Rhoads; Vitali Sintchenko; Carol A Rauch; Liron Pantanowitz
Journal:  Clin Microbiol Rev       Date:  2014-10       Impact factor: 26.132

4.  Automated focusing in bright-field microscopy for tuberculosis detection.

Authors:  O A Osibote; R Dendere; S Krishnan; T S Douglas
Journal:  J Microsc       Date:  2010-11       Impact factor: 1.758

5.  Creating a virtual slide map from sputum smear images for region-of-interest localisation in automated microscopy.

Authors:  Bhavin Patel; Tania S Douglas
Journal:  Comput Methods Programs Biomed       Date:  2012-01-17       Impact factor: 5.428

6.  Automated detection of tuberculosis in Ziehl-Neelsen-stained sputum smears using two one-class classifiers.

Authors:  R Khutlang; S Krishnan; A Whitelaw; T S Douglas
Journal:  J Microsc       Date:  2010-01       Impact factor: 1.758

7.  Classification of Mycobacterium tuberculosis in images of ZN-stained sputum smears.

Authors:  Rethabile Khutlang; Sriram Krishnan; Ronald Dendere; Andrew Whitelaw; Konstantinos Veropoulos; Genevieve Learmonth; Tania S Douglas
Journal:  IEEE Trans Inf Technol Biomed       Date:  2009-09-01

8.  Morphological characterization of Mycobacterium tuberculosis in a MODS culture for an automatic diagnostics through pattern recognition.

Authors:  Alicia Alva; Fredy Aquino; Robert H Gilman; Carlos Olivares; David Requena; Andrés H Gutiérrez; Luz Caviedes; Jorge Coronel; Sandra Larson; Patricia Sheen; David A J Moore; Mirko Zimic
Journal:  PLoS One       Date:  2013-12-16       Impact factor: 3.240

9.  "Proof-of-concept" evaluation of an automated sputum smear microscopy system for tuberculosis diagnosis.

Authors:  James J Lewis; Violet N Chihota; Minty van der Meulen; P Bernard Fourie; Katherine L Fielding; Alison D Grant; Susan E Dorman; Gavin J Churchyard
Journal:  PLoS One       Date:  2012-11-29       Impact factor: 3.240

Review 10.  Rapid culture-based diagnosis of pulmonary tuberculosis in developed and developing countries.

Authors:  Shady Asmar; Michel Drancourt
Journal:  Front Microbiol       Date:  2015-11-03       Impact factor: 5.640

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