Literature DB >> 18418736

The evolutionary history and tissue mapping of amino acid transporters belonging to solute carrier families SLC32, SLC36, and SLC38.

Björn E Sundberg1, Elin Wååg, Josefin A Jacobsson, Olga Stephansson, Juris Rumaks, Simons Svirskis, Johan Alsiö, Erika Roman, Ted Ebendal, Vija Klusa, Robert Fredriksson.   

Abstract

Members of the solute carrier families (SLC) 32, 36, and 38, together also designated the beta-group of SLCs, are known to transport neutral amino acids. In this paper, we show that these three families were present before the split of the animal lineage and that they are likely to share a common decent. We also show that the APF transporters found in plants are most likely homologous to the mammalian beta-group, suggesting that this type of transporters arouse early in the evolution of eukaryotes. We performed detailed tissue expression analysis of all the members of the beta-group in rat and found several examples of highly specific expression patterns, with SLC38A7 being exclusively found in liver, SLC38A5 in blood, and SLC38A4 in muscle and liver. Moreover, we found that SLC38A10 is expressed in several endocrine organs. We also found that SLC38A1 is highly up regulated in the cortex from rats treated with diazepam and that SLC38A2 is significantly down regulated in the same tissue. In addition, we performed a detailed expression analysis of SLC38A1 and SLC38A6 in mouse brain using in situ hybridization, which showed that both these transporters are widely expressed in the brain.

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Year:  2008        PMID: 18418736     DOI: 10.1007/s12031-008-9046-x

Source DB:  PubMed          Journal:  J Mol Neurosci        ISSN: 0895-8696            Impact factor:   3.444


  38 in total

1.  A novel system A isoform mediating Na+/neutral amino acid cotransport.

Authors:  D Yao; B Mackenzie; H Ming; H Varoqui; H Zhu; M A Hediger; J D Erickson
Journal:  J Biol Chem       Date:  2000-07-28       Impact factor: 5.157

2.  Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data.

Authors:  Christian Ramakers; Jan M Ruijter; Ronald H Lekanne Deprez; Antoon F M Moorman
Journal:  Neurosci Lett       Date:  2003-03-13       Impact factor: 3.046

3.  Immunohistochemical localization of the amino acid transporter SNAT2 in the rat brain.

Authors:  I M González-González; B Cubelos; C Giménez; F Zafra
Journal:  Neuroscience       Date:  2005       Impact factor: 3.590

4.  The transporters GlyT2 and VIAAT cooperate to determine the vesicular glycinergic phenotype.

Authors:  Karin R Aubrey; Francesco M Rossi; Raquel Ruivo; Silvia Alboni; Gian Carlo Bellenchi; Anne Le Goff; Bruno Gasnier; Stéphane Supplisson
Journal:  J Neurosci       Date:  2007-06-06       Impact factor: 6.167

5.  A screen for neurotransmitter transporters expressed in the visual system of Drosophila melanogaster identifies three novel genes.

Authors:  Rafael Romero-Calderón; Ratula M Shome; Anne F Simon; Richard W Daniels; Aaron DiAntonio; David E Krantz
Journal:  Dev Neurobiol       Date:  2007-04       Impact factor: 3.964

6.  Differential regulation of amino acid transporter SNAT3 by insulin in hepatocytes.

Authors:  Sumin Gu; Carla J Villegas; Jean X Jiang
Journal:  J Biol Chem       Date:  2005-05-16       Impact factor: 5.157

Review 7.  Sodium-coupled neutral amino acid (System N/A) transporters of the SLC38 gene family.

Authors:  Bryan Mackenzie; Jeffrey D Erickson
Journal:  Pflugers Arch       Date:  2003-07-04       Impact factor: 3.657

8.  The G-protein-coupled receptors in the human genome form five main families. Phylogenetic analysis, paralogon groups, and fingerprints.

Authors:  Robert Fredriksson; Malin C Lagerström; Lars-Gustav Lundin; Helgi B Schiöth
Journal:  Mol Pharmacol       Date:  2003-06       Impact factor: 4.436

9.  The G protein-coupled receptor subset of the chicken genome.

Authors:  Malin C Lagerström; Anders R Hellström; David E Gloriam; Thomas P Larsson; Helgi B Schiöth; Robert Fredriksson
Journal:  PLoS Comput Biol       Date:  2006-06-02       Impact factor: 4.475

10.  Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes.

Authors:  Jo Vandesompele; Katleen De Preter; Filip Pattyn; Bruce Poppe; Nadine Van Roy; Anne De Paepe; Frank Speleman
Journal:  Genome Biol       Date:  2002-06-18       Impact factor: 13.583

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  37 in total

1.  Identification of SLC38A7 (SNAT7) protein as a glutamine transporter expressed in neurons.

Authors:  Maria G A Hägglund; Smitha Sreedharan; Victor C O Nilsson; Jafar H A Shaik; Ingrid M Almkvist; Sofi Bäcklin; Orjan Wrange; Robert Fredriksson
Journal:  J Biol Chem       Date:  2011-04-21       Impact factor: 5.157

Review 2.  The SLC36 family of proton-coupled amino acid transporters and their potential role in drug transport.

Authors:  David T Thwaites; Catriona M H Anderson
Journal:  Br J Pharmacol       Date:  2011-12       Impact factor: 8.739

3.  Putative transmembrane transporter modulates higher-level aggression in Drosophila.

Authors:  Budhaditya Chowdhury; Yick-Bun Chan; Edward A Kravitz
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-13       Impact factor: 11.205

4.  Metabolism. Lysosomal amino acid transporter SLC38A9 signals arginine sufficiency to mTORC1.

Authors:  Shuyu Wang; Zhi-Yang Tsun; Rachel L Wolfson; Kuang Shen; Gregory A Wyant; Molly E Plovanich; Elizabeth D Yuan; Tony D Jones; Lynne Chantranupong; William Comb; Tim Wang; Liron Bar-Peled; Roberto Zoncu; Christoph Straub; Choah Kim; Jiwon Park; Bernardo L Sabatini; David M Sabatini
Journal:  Science       Date:  2015-01-07       Impact factor: 47.728

5.  The Concise Guide to PHARMACOLOGY 2013/14: transporters.

Authors:  Stephen P H Alexander; Helen E Benson; Elena Faccenda; Adam J Pawson; Joanna L Sharman; Michael Spedding; John A Peters; Anthony J Harmar
Journal:  Br J Pharmacol       Date:  2013-12       Impact factor: 8.739

6.  Absorptive transport of amino acids by the rat colon.

Authors:  Yuxin Chen; Meredith M Dinges; Andrew Green; Scott E Cramer; Cynthia K Larive; Christian Lytle
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2019-11-25       Impact factor: 4.052

7.  Functional expression of two system A glutamine transporter isoforms in rat auditory brainstem neurons.

Authors:  A Blot; D Billups; M Bjørkmo; A Z Quazi; N M Uwechue; F A Chaudhry; B Billups
Journal:  Neuroscience       Date:  2009-09-12       Impact factor: 3.590

8.  Functions of the SLC36 transporter Pathetic in growth control.

Authors:  Wen-Yang Lin; Claire R Williams; Connie Yan; Jay Z Parrish
Journal:  Fly (Austin)       Date:  2015       Impact factor: 2.160

Review 9.  Regulation and function of the SLC38A3/SNAT3 glutamine transporter.

Authors:  Isabel Rubio-Aliaga; Carsten A Wagner
Journal:  Channels (Austin)       Date:  2016-06-30       Impact factor: 2.581

10.  Glutamate, aspartate and nucleotide transporters in the SLC17 family form four main phylogenetic clusters: evolution and tissue expression.

Authors:  Smitha Sreedharan; Jafar H A Shaik; Pawel K Olszewski; Allen S Levine; Helgi B Schiöth; Robert Fredriksson
Journal:  BMC Genomics       Date:  2010-01-08       Impact factor: 3.969

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