Literature DB >> 18412424

Intramolecular basis set superposition error effects on the planarity of benzene and other aromatic molecules: a solution to the problem.

David Asturiol1, Miquel Duran, Pedro Salvador.   

Abstract

Recently, the surprising result that ab initio calculations on benzene and other planar arenes at correlated MP2, MP3, configuration interaction with singles and doubles (CISD), and coupled cluster with singles and doubles levels of theory using standard Pople's basis sets yield nonplanar minima has been reported. The planar optimized structures turn out to be transition states presenting one or more large imaginary frequencies, whereas single-determinant-based methods lead to the expected planar minima and no imaginary frequencies. It has been suggested that such anomalous behavior can be originated by two-electron basis set incompleteness error. In this work, we show that the reported pitfalls can be interpreted in terms of intramolecular basis set superposition error (BSSE) effects, mostly between the C-H moieties constituting the arenes. We have carried out counterpoise-corrected optimizations and frequency calculations at the Hartree-Fock, B3LYP, MP2, and CISD levels of theory with several basis sets for a number of arenes. In all cases, correcting for intramolecular BSSE fixes the anomalous behavior of the correlated methods, whereas no significant differences are observed in the single-determinant case. Consequently, all systems studied are planar at all levels of theory. The effect of different intramolecular fragment definitions and the particular case of charged species, namely, cyclopentadienyl and indenyl anions, respectively, are also discussed.

Entities:  

Year:  2008        PMID: 18412424     DOI: 10.1063/1.2902974

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  7 in total

1.  Model for the fast estimation of basis set superposition error in biomolecular systems.

Authors:  John C Faver; Zheng Zheng; Kenneth M Merz
Journal:  J Chem Phys       Date:  2011-10-14       Impact factor: 3.488

2.  A comparison of the behavior of functional/basis set combinations for hydrogen-bonding in the water dimer with emphasis on basis set superposition error.

Authors:  Joshua A Plumley; J J Dannenberg
Journal:  J Comput Chem       Date:  2011-02-15       Impact factor: 3.376

3.  Insight into a molecular interaction force supporting peptide backbones and its implication to protein loops and folding.

Authors:  Qi-Shi Du; Dong Chen; Neng-Zhong Xie; Ri-Bo Huang; Kuo-Chen Chou
Journal:  J Biomol Struct Dyn       Date:  2014-12-22

4.  A benchmark study of aromaticity indexes for benzene, pyridine and the diazines - I. Ground state aromaticity.

Authors:  Jacob Pedersen; Kurt V Mikkelsen
Journal:  RSC Adv       Date:  2022-01-19       Impact factor: 3.361

5.  Automatic generation of complementary auxiliary basis sets for explicitly correlated methods.

Authors:  Emmanouil Semidalas; Jan M L Martin
Journal:  J Comput Chem       Date:  2022-07-19       Impact factor: 3.672

6.  Theoretical study on the polar hydrogen-π (Hp-π) interactions between protein side chains.

Authors:  Qi-Shi Du; Qing-Yan Wang; Li-Qin Du; Dong Chen; Ri-Bo Huang
Journal:  Chem Cent J       Date:  2013-05-25       Impact factor: 4.215

7.  On the Use of Popular Basis Sets: Impact of the Intramolecular Basis Set Superposition Error.

Authors:  Ángel Vidal Vidal; Luis Carlos de Vicente Poutás; Olalla Nieto Faza; Carlos Silva López
Journal:  Molecules       Date:  2019-10-22       Impact factor: 4.411

  7 in total

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