Literature DB >> 18398174

Archaeoglobus infectus sp. nov., a novel thermophilic, chemolithoheterotrophic archaeon isolated from a deep-sea rock collected at Suiyo Seamount, Izu-Bonin Arc, western Pacific Ocean.

Koji Mori1, Akihiko Maruyama, Tetsuro Urabe, Ken-Ichiro Suzuki, Satoshi Hanada.   

Abstract

A novel thermophilic, strictly anaerobic archaeon, designated strain Arc51T, was isolated from a rock sample collected from a deep-sea hydrothermal field in Suiyo Seamount, Izu-Bonin Arc, western Pacific Ocean. Cells of the isolate were irregular cocci with single flagella and exhibited blue-green fluorescence at 436 nm. The optimum temperature, pH and NaCl concentration for growth were 70 degrees C, pH 6.5 and 3 % (w/v), respectively. Strain Arc51T could grow on thiosulfate or sulfite as an electron acceptor in the presence of hydrogen. This strain required acetate as a carbon source for its growth, suggesting that the reductive acetyl CoA pathway for CO2 fixation was incomplete. In addition, coenzyme M (2-mercaptoethanesulfonic acid), which is a known methyl carrier in methanogenesis, was also a requirement for growth of the strain. Analysis of the 16S rRNA gene sequence revealed that the isolate was similar to members of the genus Archaeoglobus, with sequence similarities of 93.6-97.2 %; the closest relative was Archaeoglobus veneficus. Phylogenetic analyses of the dsrAB and apsA genes, encoding the alpha and beta subunits of dissimilatory sulfite reductase and the alpha subunit of adenosine-5'-phosphosulfate reductase, respectively, produced results similar to those inferred from comparisons based on the 16S rRNA gene sequence. On the basis of phenotypic and phylogenetic data, strain Arc51T represents a novel species of the genus Archaeoglobus, for which the name Archaeoglobus infectus sp. nov. is proposed. The type strain is Arc51T (=NBRC 100649T=DSM 18877T).

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Year:  2008        PMID: 18398174     DOI: 10.1099/ijs.0.65422-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  13 in total

1.  First cultivation and ecological investigation of a bacterium affiliated with the candidate phylum OP5 from hot springs.

Authors:  Koji Mori; Michinari Sunamura; Katsunori Yanagawa; Jun-ichiro Ishibashi; Youko Miyoshi; Takao Iino; Ken-Ichiro Suzuki; Tetsuro Urabe
Journal:  Appl Environ Microbiol       Date:  2008-09-05       Impact factor: 4.792

Review 2.  Perspectives on Cultivation Strategies of Archaea.

Authors:  Yihua Sun; Yang Liu; Jie Pan; Fengping Wang; Meng Li
Journal:  Microb Ecol       Date:  2019-08-20       Impact factor: 4.552

3.  Assessing the Diversity of Benthic Sulfate-Reducing Microorganisms in Northwestern Gulf of Mexico by Illumina Sequencing of dsrB Gene.

Authors:  Ma Fernanda Sánchez-Soto; Daniel Cerqueda-García; Rocío J Alcántara-Hernández; Luisa I Falcón; Daniel Pech; Flor Árcega-Cabrera; Ma Leopoldina Aguirre-Macedo; José Q García-Maldonado
Journal:  Microb Ecol       Date:  2020-11-09       Impact factor: 4.552

4.  Aceticlastic and NaCl-requiring methanogen "Methanosaeta pelagica" sp. nov., isolated from marine tidal flat sediment.

Authors:  Koji Mori; Takao Iino; Ken-Ichiro Suzuki; Kaoru Yamaguchi; Yoichi Kamagata
Journal:  Appl Environ Microbiol       Date:  2012-02-17       Impact factor: 4.792

5.  Anaerobic oxidation of fatty acids and alkenes by the hyperthermophilic sulfate-reducing archaeon Archaeoglobus fulgidus.

Authors:  Nadia Khelifi; Vincent Grossi; Moktar Hamdi; Alain Dolla; Jean-Luc Tholozan; Bernard Ollivier; Agnès Hirschler-Réa
Journal:  Appl Environ Microbiol       Date:  2010-03-19       Impact factor: 4.792

6.  Complete Genome Sequence of the Thermophilic and Facultatively Chemolithoautotrophic Sulfate Reducer Archaeoglobus sulfaticallidus Strain PM70-1T.

Authors:  Runar Stokke; William Peter Hocking; Bjørn Olav Steinsbu; Ida Helene Steen
Journal:  Genome Announc       Date:  2013-07-05

7.  Complete genome sequence of Archaeoglobus profundus type strain (AV18).

Authors:  Mathias von Jan; Alla Lapidus; Tijana Glavina Del Rio; Alex Copeland; Hope Tice; Jan-Fang Cheng; Susan Lucas; Feng Chen; Matt Nolan; Lynne Goodwin; Cliff Han; Sam Pitluck; Konstantinos Liolios; Natalia Ivanova; Konstantinos Mavromatis; Galina Ovchinnikova; Olga Chertkov; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Yun-Juan Chang; Cynthia D Jeffries; Elizabeth Saunders; Thomas Brettin; John C Detter; Patrick Chain; Konrad Eichinger; Harald Huber; Stefan Spring; Manfred Rohde; Markus Göker; Reinhard Wirth; Tanja Woyke; Jim Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C Kyrpides; Hans-Peter Klenk
Journal:  Stand Genomic Sci       Date:  2010-06-15

8.  The complete genome sequence and emendation of the hyperthermophilic, obligate iron-reducing archaeon "Geoglobus ahangari" strain 234(T).

Authors:  Michael P Manzella; Dawn E Holmes; Jessica M Rocheleau; Amanda Chung; Gemma Reguera; Kazem Kashefi
Journal:  Stand Genomic Sci       Date:  2015-10-09

9.  A RuBisCO-mediated carbon metabolic pathway in methanogenic archaea.

Authors:  Takunari Kono; Sandhya Mehrotra; Chikako Endo; Natsuko Kizu; Mami Matusda; Hiroyuki Kimura; Eiichi Mizohata; Tsuyoshi Inoue; Tomohisa Hasunuma; Akiho Yokota; Hiroyoshi Matsumura; Hiroki Ashida
Journal:  Nat Commun       Date:  2017-01-13       Impact factor: 14.919

10.  Complete genome sequence analysis of Archaeoglobus fulgidus strain 7324 (DSM 8774), a hyperthermophilic archaeal sulfate reducer from a North Sea oil field.

Authors:  Nils-Kåre Birkeland; Peter Schönheit; Lianna Poghosyan; Anne Fiebig; Hans-Peter Klenk
Journal:  Stand Genomic Sci       Date:  2017-12-16
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