Literature DB >> 18397311

Sources for sedimentary bacteriohopanepolyols as revealed by 16S rDNA stratigraphy.

Marco J L Coolen1, Helen M Talbot, Ben A Abbas, Christopher Ward, Stefan Schouten, John K Volkman, Jaap S Sinninghe Damsté.   

Abstract

Bacteriohopanoids are widespread lipid biomarkers in the sedimentary record. Many aerobic and anaerobic bacteria are potential sources of these lipids which sometimes complicates the use of these biomarkers as proxies for ecological and environmental changes. Therefore, we applied preserved 16S ribosomal RNA genes to identify likely Holocene biological sources of bacteriohopanepolyols (BHPs) in the sulfidic sediments of the permanently stratified postglacial Ace Lake, Antarctica. A suite of intact BHPs were identified, which revealed a variety of structural forms whose composition differed through the sediment core reflecting changes in bacterial populations induced by large changes in lake salinity. Stable isotopic compositions of the hopanols formed from periodic acid-cleaved BHPs, showed that some were substantially depleted in (13)C, indicative of their methanotrophic origin. Using sensitive molecular tools, we found that Type I and II methanotrophic bacteria (respectively Methylomonas and Methylocystis) were unique to the oldest lacustrine sediments (> 9400 years BP), but quantification of fossil DNA revealed that the Type I methanotrophs, including methanotrophs related to methanotrophic gill symbionts of deep-sea cold-seep mussels, were the main precursors of the 35-amino BHPs (i.e. aminopentol, -tetrol and -triols). After isolation of the lake approximately 3000 years ago, one Type I methanotroph of the 'methanotrophic gill symbionts cluster' remained the most obvious source of aminotetrol and -triol. We, furthermore, identified a Synechococcus phylotype related to pelagic freshwater strains in the oldest lacustrine sediments as a putative source of 2-methylbacteriohopanetetrol (2-Me BHT). This combined application of advanced geochemical and paleogenomical tools further refined our knowledge about Holocene biogeochemical processes in Ace Lake.

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Year:  2008        PMID: 18397311     DOI: 10.1111/j.1462-2920.2008.01601.x

Source DB:  PubMed          Journal:  Environ Microbiol        ISSN: 1462-2912            Impact factor:   5.491


  9 in total

1.  Is Planktonic Diversity Well Recorded in Sedimentary DNA? Toward the Reconstruction of Past Protistan Diversity.

Authors:  Eric Capo; Didier Debroas; Fabien Arnaud; Isabelle Domaizon
Journal:  Microb Ecol       Date:  2015-05-29       Impact factor: 4.552

2.  Microbial DNA records historical delivery of anthropogenic mercury.

Authors:  Alexandre J Poulain; Stéphane Aris-Brosou; Jules M Blais; Michelle Brazeau; Wendel Bill Keller; Andrew M Paterson
Journal:  ISME J       Date:  2015-06-09       Impact factor: 10.302

3.  The Bacteriohopanepolyol Inventory of Novel Aerobic Methane Oxidising Bacteria Reveals New Biomarker Signatures of Aerobic Methanotrophy in Marine Systems.

Authors:  Darci Rush; Kate A Osborne; Daniel Birgel; Andreas Kappler; Hisako Hirayama; Jörn Peckmann; Simon W Poulton; Julia C Nickel; Kai Mangelsdorf; Marina Kalyuzhnaya; Frances R Sidgwick; Helen M Talbot
Journal:  PLoS One       Date:  2016-11-08       Impact factor: 3.240

4.  Preservation and Significance of Extracellular DNA in Ferruginous Sediments from Lake Towuti, Indonesia.

Authors:  Aurèle Vuillemin; Fabian Horn; Mashal Alawi; Cynthia Henny; Dirk Wagner; Sean A Crowe; Jens Kallmeyer
Journal:  Front Microbiol       Date:  2017-07-27       Impact factor: 5.640

5.  Pheno- and Genotyping of Hopanoid Production in Acidobacteria.

Authors:  Jaap S Sinninghe Damsté; W Irene C Rijpstra; Svetlana N Dedysh; Bärbel U Foesel; Laura Villanueva
Journal:  Front Microbiol       Date:  2017-06-08       Impact factor: 5.640

6.  Molecular and Pigment Analyses Provide Comparative Results When Reconstructing Historic Cyanobacterial Abundances from Lake Sediment Cores.

Authors:  Maïlys Picard; Susanna A Wood; Xavier Pochon; Marcus J Vandergoes; Lizette Reyes; Jamie D Howarth; Ian Hawes; Jonathan Puddick
Journal:  Microorganisms       Date:  2022-01-25

7.  Sediment bacterial communities reflect the history of a sea basin.

Authors:  Christina Lyra; Hanna Sinkko; Matias Rantanen; Lars Paulin; Aarno Kotilainen
Journal:  PLoS One       Date:  2013-01-23       Impact factor: 3.240

8.  Sedimentary archaeal amoA gene abundance reflects historic nutrient level and salinity fluctuations in Qinghai Lake, Tibetan Plateau.

Authors:  Jian Yang; Hongchen Jiang; Hailiang Dong; Weiguo Hou; Gaoyuan Li; Geng Wu
Journal:  Sci Rep       Date:  2015-12-15       Impact factor: 4.379

9.  Specific Chemical and Genetic Markers Revealed a Thousands-Year Presence of Toxic Nodularia spumigena in the Baltic Sea.

Authors:  Marta Cegłowska; Anna Toruńska-Sitarz; Grażyna Kowalewska; Hanna Mazur-Marzec
Journal:  Mar Drugs       Date:  2018-04-04       Impact factor: 5.118

  9 in total

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