Literature DB >> 18392654

Characterization of mouse Dactylaplasia mutations: a model for human ectrodactyly SHFM3.

Marc Friedli1, Sergey Nikolaev, Robert Lyle, Mélanie Arcangeli, Denis Duboule, François Spitz, Stylianos E Antonarakis.   

Abstract

SHFM3 is a limb malformation characterized by the absence of central digits. It has been shown that this condition is associated with tandem duplications of about 500 kb at 10q24. The Dactylaplasia mice display equivalent limb defects and the two corresponding alleles (Dac1j and Dac2j) map in the region syntenic with the duplications in SHFM3. Dac1j was shown to be associated with an insertion of an unspecified ETn-like mouse endogenous transposon upstream of the Fbxw4 gene. Dac2j was also thought to be an insertion or a small inversion in intron 5 of Fbxw4, but the breakpoints and the exact molecular lesion have not yet been characterized. Here we report precise mapping and characterization of these alleles. We failed to identify any copy number differences within the SHFM3 orthologous genomic locus between Dac mutant and wild-type littermates, showing that the Dactylaplasia alleles are not associated with duplications of the region, in contrast with the described human SHFM3 cases. We further show that both Dac1j and Dac2j are caused by insertions of MusD retroelements that share 98% sequence identity. The differences between the nature of the human and mouse genomic abnormalities argue against models proposed so far that either envisioned SHFM3 as a local trisomy or Dac as a mutant allele of Fbxw4. Instead, both genetic conditions might lead to complex alterations of gene regulation mechanisms that would impair limb morphogenesis. Interestingly, the Dac2j mutation occurs within a highly conserved element that may represent a regulatory sequence for a neighboring gene.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18392654     DOI: 10.1007/s00335-008-9106-0

Source DB:  PubMed          Journal:  Mamm Genome        ISSN: 0938-8990            Impact factor:   2.957


  23 in total

Review 1.  Patterning mechanisms controlling vertebrate limb development.

Authors:  J Capdevila; J C Izpisúa Belmonte
Journal:  Annu Rev Cell Dev Biol       Date:  2001       Impact factor: 13.827

2.  BLAT--the BLAST-like alignment tool.

Authors:  W James Kent
Journal:  Genome Res       Date:  2002-04       Impact factor: 9.043

Review 3.  Side effects of genome structural changes.

Authors:  Alexandre Reymond; Charlotte N Henrichsen; Louise Harewood; Giuseppe Merla
Journal:  Curr Opin Genet Dev       Date:  2007-10-24       Impact factor: 5.578

4.  Split-hand/split-foot malformation 3 (SHFM3) at 10q24, development of rapid diagnostic methods and gene expression from the region.

Authors:  Robert Lyle; Uppala Radhakrishna; Jean-Louis Blouin; Sarantis Gagos; David B Everman; Corinne Gehrig; Celia Delozier-Blanchet; Jitendra V Solanki; Uday C Patel; Swapan K Nath; Fiorella Gurrieri; Giovanni Neri; Charles E Schwartz; Stylianos E Antonarakis
Journal:  Am J Med Genet A       Date:  2006-07-01       Impact factor: 2.802

5.  A novel member of the F-box/WD40 gene family, encoding dactylin, is disrupted in the mouse dactylaplasia mutant.

Authors:  A Sidow; M S Bulotsky; A W Kerrebrock; B W Birren; D Altshuler; R Jaenisch; K R Johnson; E S Lander
Journal:  Nat Genet       Date:  1999-09       Impact factor: 38.330

6.  In vivo enhancer analysis of human conserved non-coding sequences.

Authors:  Len A Pennacchio; Nadav Ahituv; Alan M Moses; Shyam Prabhakar; Marcelo A Nobrega; Malak Shoukry; Simon Minovitsky; Inna Dubchak; Amy Holt; Keith D Lewis; Ingrid Plajzer-Frick; Jennifer Akiyama; Sarah De Val; Veena Afzal; Brian L Black; Olivier Couronne; Michael B Eisen; Axel Visel; Edward M Rubin
Journal:  Nature       Date:  2006-11-05       Impact factor: 49.962

7.  Mapping the mouse dactylaplasia mutation, Dac, and a gene that controls its expression, mdac.

Authors:  K R Johnson; P W Lane; P Ward-Bailey; M T Davisson
Journal:  Genomics       Date:  1995-09-20       Impact factor: 5.736

8.  Genetically regulated epigenetic transcriptional activation of retrotransposon insertion confers mouse dactylaplasia phenotype.

Authors:  Hiroki Kano; Hiroki Kurahashi; Tatsushi Toda
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-05       Impact factor: 11.205

9.  A genomic rearrangement resulting in a tandem duplication is associated with split hand-split foot malformation 3 (SHFM3) at 10q24.

Authors:  Xavier J de Mollerat; Fiorella Gurrieri; Chad T Morgan; Eugenio Sangiorgi; David B Everman; Paola Gaspari; Jeanne Amiel; Michael J Bamshad; Robert Lyle; Jean-Louis Blouin; Judith E Allanson; Bernard Le Marec; Melba Wilson; Nancy E Braverman; Uppala Radhakrishna; Celia Delozier-Blanchet; Albert Abbott; Vincent Elghouzzi; Stylianos Antonarakis; Roger E Stevenson; Arnold Munnich; Giovanni Neri; Charles E Schwartz
Journal:  Hum Mol Genet       Date:  2003-08-15       Impact factor: 6.150

Review 10.  Long-range control of gene expression: emerging mechanisms and disruption in disease.

Authors:  Dirk A Kleinjan; Veronica van Heyningen
Journal:  Am J Hum Genet       Date:  2004-11-17       Impact factor: 11.025

View more
  7 in total

1.  Duplication of 10q24 locus: broadening the clinical and radiological spectrum.

Authors:  Muriel Holder-Espinasse; Aleksander Jamsheer; Fabienne Escande; Joris Andrieux; Florence Petit; Anna Sowinska-Seidler; Magdalena Socha; Anna Jakubiuk-Tomaszuk; Marion Gerard; Michèle Mathieu-Dramard; Valérie Cormier-Daire; Alain Verloes; Annick Toutain; Ghislaine Plessis; Philippe Jonveaux; Clarisse Baumann; Albert David; Chantal Farra; Estelle Colin; Sébastien Jacquemont; Annick Rossi; Sahar Mansour; Neeti Ghali; Anne Moncla; Nayana Lahiri; Jane Hurst; Elena Pollina; Christine Patch; Joo Wook Ahn; Anne-Sylvie Valat; Aurélie Mezel; Philippe Bourgeot; David Zhang; Sylvie Manouvrier-Hanu
Journal:  Eur J Hum Genet       Date:  2019-01-08       Impact factor: 4.246

Review 2.  Phenotypic impact of genomic structural variation: insights from and for human disease.

Authors:  Joachim Weischenfeldt; Orsolya Symmons; François Spitz; Jan O Korbel
Journal:  Nat Rev Genet       Date:  2013-02       Impact factor: 53.242

3.  Six2 and Wnt regulate self-renewal and commitment of nephron progenitors through shared gene regulatory networks.

Authors:  Joo-Seop Park; Wenxiu Ma; Lori L O'Brien; Eunah Chung; Jin-Jin Guo; Jr-Gang Cheng; M Todd Valerius; Jill A McMahon; Wing Hung Wong; Andrew P McMahon
Journal:  Dev Cell       Date:  2012-08-16       Impact factor: 12.270

4.  De novo DNA methylation of endogenous retroviruses is shaped by KRAB-ZFPs/KAP1 and ESET.

Authors:  Helen M Rowe; Marc Friedli; Sandra Offner; Sonia Verp; Daniel Mesnard; Julien Marquis; Tugce Aktas; Didier Trono
Journal:  Development       Date:  2013-02-01       Impact factor: 6.868

5.  DLX5, FGF8 and the Pin1 isomerase control ΔNp63α protein stability during limb development: a regulatory loop at the basis of the SHFM and EEC congenital malformations.

Authors:  Michela Restelli; Teresa Lopardo; Nadia Lo Iacono; Giulia Garaffo; Daniele Conte; Alessandra Rustighi; Marco Napoli; Giannino Del Sal; David Perez-Morga; Antonio Costanzo; Giorgio Roberto Merlo; Luisa Guerrini
Journal:  Hum Mol Genet       Date:  2014-02-25       Impact factor: 6.150

6.  Sp6 and Sp8 transcription factors control AER formation and dorsal-ventral patterning in limb development.

Authors:  Endika Haro; Irene Delgado; Marisa Junco; Yoshihiko Yamada; Ahmed Mansouri; Kerby C Oberg; Marian A Ros
Journal:  PLoS Genet       Date:  2014-08-28       Impact factor: 5.917

Review 7.  Strain-Specific Epigenetic Regulation of Endogenous Retroviruses: The Role of Trans-Acting Modifiers.

Authors:  Jessica L Elmer; Anne C Ferguson-Smith
Journal:  Viruses       Date:  2020-07-27       Impact factor: 5.818

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.