Literature DB >> 18390682

Bayesian-integrated microbial forensics.

Kristin H Jarman1, Helen W Kreuzer-Martin, David S Wunschel, Nancy B Valentine, John B Cliff, Catherine E Petersen, Heather A Colburn, Karen L Wahl.   

Abstract

In the aftermath of the 2001 anthrax letters, researchers have been exploring ways to predict the production environment of unknown-source microorganisms. Culture medium, presence of agar, culturing temperature, and drying method are just some of the broad spectrum of characteristics an investigator might like to infer. The effects of many of these factors on microorganisms are not well understood, but the complex way in which microbes interact with their environments suggests that numerous analytical techniques measuring different properties will eventually be needed for complete characterization. In this work, we present a Bayesian statistical framework for integrating disparate analytical measurements. We illustrate its application to the problem of characterizing the culture medium of Bacillus spores using three different mass spectral techniques. The results of our study suggest that integrating data in this way significantly improves the accuracy and robustness of the analyses.

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Year:  2008        PMID: 18390682      PMCID: PMC2423015          DOI: 10.1128/AEM.02526-07

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  19 in total

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4.  Stable isotope ratios as a tool in microbial forensics--Part 2. Isotopic variation among different growth media as a tool for sourcing origins of bacterial cells or spores.

Authors:  Helen W Kreuzer-Martin; Lesley A Chesson; Michael J Lott; Janet V Dorigan; James R Ehleringer
Journal:  J Forensic Sci       Date:  2004-09       Impact factor: 1.832

5.  Effect of culture conditions on microorganism identification by matrix-assisted laser desorption ionization mass spectrometry.

Authors:  Nancy Valentine; Sharon Wunschel; David Wunschel; Catherine Petersen; Karen Wahl
Journal:  Appl Environ Microbiol       Date:  2005-01       Impact factor: 4.792

6.  Stable isotope ratios and forensic analysis of microorganisms.

Authors:  Helen W Kreuzer-Martin; Kristin H Jarman
Journal:  Appl Environ Microbiol       Date:  2007-04-27       Impact factor: 4.792

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8.  The stability of messenger ribonucleic acid during sporulation in Bacillus subtilis.

Authors:  T J Leighton; R H Doi
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9.  Quantitative determination of heme for forensic characterization of bacillus spores using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry.

Authors:  Jeffrey R Whiteaker; Catherine C Fenselau; Dean Fetterolf; Darin Steele; David Wilson
Journal:  Anal Chem       Date:  2004-05-15       Impact factor: 6.986

10.  Microbe forensics: oxygen and hydrogen stable isotope ratios in Bacillus subtilis cells and spores.

Authors:  Helen W Kreuzer-Martin; Michael J Lott; Janet Dorigan; James R Ehleringer
Journal:  Proc Natl Acad Sci U S A       Date:  2003-01-27       Impact factor: 11.205

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Journal:  Appl Environ Microbiol       Date:  2010-01-22       Impact factor: 4.792

2.  Using Bayes' rule to define the value of evidence from syndromic surveillance.

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Journal:  PLoS One       Date:  2014-11-03       Impact factor: 3.240

3.  VIBE 2.0: visual integration for bayesian evaluation.

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