Literature DB >> 18390573

Concept, strategy and realization of lectin-based glycan profiling.

Jun Hirabayashi1.   

Abstract

Lectins are a diverse group of carbohydrate-binding proteins. Each lectin has its own specificity profile. It is believed that lectins exist in all living organisms that produce glycans. From a practical viewpoint, lectins have been used extensively in biochemical fields including proteomics due to their usefulness as detection and enrichment tools for specific glycans. Nevertheless, they have often been underestimated as probes, especially compared with antibodies, because of their low affinity and broad specificity. However, together with the concept of glycomics, such properties of lectins are now considered to be suitable for the task of 'profiling' in order to cover a wider range of ligands. Recently there has been rapid movement in the field of proteomics aimed at the investigation of glycan-related biomarkers. This is partly because of limitations of the present approach of simply following changes in protein-level expression, without paying sufficient attention to the fact and effects of glycosylation. The trend is reflected in the frequent use of lectins in the contexts of glycoprotein enrichment and glycan profiling. However, there are many aspects to be considered in using lectins, which differ considerably from antibodies. In this article, the author, as a developer of two unique methodologies, frontal affinity chromatography (FAC) and the lectin microarray, describes critical points concerning the use of lectins, together with the concept, strategy and means to achieve advances in these emerging glycan profiling technologies.

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Year:  2008        PMID: 18390573     DOI: 10.1093/jb/mvn043

Source DB:  PubMed          Journal:  J Biochem        ISSN: 0021-924X            Impact factor:   3.387


  36 in total

1.  Membrane-assisted online renaturation for automated microfluidic lectin blotting.

Authors:  Mei He; Jan Novak; Bruce A Julian; Amy E Herr
Journal:  J Am Chem Soc       Date:  2011-11-18       Impact factor: 15.419

2.  Imaging the glycome in living systems.

Authors:  Boyangzi Li; Feiyan Mock; Peng Wu
Journal:  Methods Enzymol       Date:  2012       Impact factor: 1.600

3.  Glycome 'fingerprints' provide definitive clues to HIV origins.

Authors:  Jun Hirabayashi
Journal:  Nat Chem Biol       Date:  2009-04       Impact factor: 15.040

4.  Cytoplasmic expression of the JM403 antigen GlcA-GlcNH3+ on heparan sulfate glycosaminoglycan in mammary carcinomas--a novel proliferative biomarker for breast cancers with high malignancy.

Authors:  Masahiro Fujii; Akiko Yusa; Yukihiro Yokoyama; Toshio Kokuryo; Nobuyuki Tsunoda; Koji Oda; Masato Nagino; Tsuyoshi Ishimaru; Yoshie Shimoyama; Hirotoshi Utsunomiya; Hiroji Iwata; Yoshiko Itoh; Johbu Itoh; Reiji Kannagi; Mamoru Kyogashima
Journal:  Glycoconj J       Date:  2010-11-03       Impact factor: 2.916

Review 5.  Mass spectrometry and glycomics.

Authors:  Joseph Zaia
Journal:  OMICS       Date:  2010-08

6.  Predictive modeling of complex ABO glycan phenotypes by lectin microarrays.

Authors:  Waseem Q Anani; Heather E Ashwood; Anna Schmidt; Robert T Burns; Gregory A Denomme; Karin M Hoffmeister
Journal:  Blood Adv       Date:  2020-08-25

7.  Cross validation of liquid chromatography-mass spectrometry and lectin array for monitoring glycosylation in fed-batch glycoprotein production.

Authors:  Catherine A Hayes; Roisin Doohan; David Kirkley; Kirk Leister; Brendan Harhen; Angela V Savage; Niclas G Karlsson
Journal:  Mol Biotechnol       Date:  2012-07       Impact factor: 2.695

8.  A lectin from the mussel Mytilus galloprovincialis has a highly novel primary structure and induces glycan-mediated cytotoxicity of globotriaosylceramide-expressing lymphoma cells.

Authors:  Yuki Fujii; Naoshi Dohmae; Koji Takio; Sarkar M A Kawsar; Ryo Matsumoto; Imtiaj Hasan; Yasuhiro Koide; Robert A Kanaly; Hidetaro Yasumitsu; Yukiko Ogawa; Shigeki Sugawara; Masahiro Hosono; Kazuo Nitta; Jiharu Hamako; Taei Matsui; Yasuhiro Ozeki
Journal:  J Biol Chem       Date:  2012-10-23       Impact factor: 5.157

Review 9.  Bioinformatics and molecular modeling in glycobiology.

Authors:  Martin Frank; Siegfried Schloissnig
Journal:  Cell Mol Life Sci       Date:  2010-04-04       Impact factor: 9.261

10.  Towards an integrated proteomic and glycomic approach to finding cancer biomarkers.

Authors:  Allen D Taylor; William S Hancock; Marina Hincapie; Naoyuki Taniguchi; Samir M Hanash
Journal:  Genome Med       Date:  2009-06-04       Impact factor: 11.117

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