Literature DB >> 18381839

Effect of destrin mutations on the gene expression profile in vivo.

Angela M Verdoni1, Natsuyo Aoyama, Akihiro Ikeda, Sakae Ikeda.   

Abstract

Remodeling of the actin cytoskeleton through actin dynamics (assembly and disassembly of filamentous actin) is known to be essential for numerous basic biological processes. In addition, recent studies have provided evidence that actin dynamics participate in the control of gene expression. A spontaneous mouse mutant, corneal disease 1 (corn1), is deficient for a regulator of actin dynamics, destrin (DSTN, also known as ADF), which causes epithelial hyperproliferation and neovascularization in the cornea. Dstn(corn1) mice exhibit an actin dynamics defect in the corneal epithelial cells, offering an in vivo model to investigate cellular mechanisms affected by the Dstn mutation and resultant actin dynamics abnormalities. To examine the effect of the Dstn(corn1) mutation on the gene expression profile, we performed a microarray analysis using the cornea from Dstn(corn1) and wild-type mice. A dramatic alteration of the gene expression profile was observed in the Dstn(corn1) cornea, with 1,226 annotated genes differentially expressed. Functional annotation of these genes revealed that the most significantly enriched functional categories are associated with actin and/or cytoskeleton. Among genes that belong to these categories, a considerable number of serum response factor target genes were found, indicating the possible existence of an actin-SRF pathway of transcriptional regulation in vivo. A comparative study using an allelic mutant strain with milder corneal phenotypes suggested that the level of filamentous actin may correlate with the level of gene expression changes. Our study shows that Dstn mutations and resultant actin dynamics abnormalities have a strong impact on the gene expression profile in vivo.

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Year:  2008        PMID: 18381839      PMCID: PMC2435404          DOI: 10.1152/physiolgenomics.00285.2007

Source DB:  PubMed          Journal:  Physiol Genomics        ISSN: 1094-8341            Impact factor:   3.107


  55 in total

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Authors:  J R Bamburg
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2.  Actin dynamics control SRF activity by regulation of its coactivator MAL.

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3.  DAVID: Database for Annotation, Visualization, and Integrated Discovery.

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Journal:  Genome Biol       Date:  2003-04-03       Impact factor: 13.583

4.  Experimental validation of novel and conventional approaches to quantitative real-time PCR data analysis.

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Journal:  Nucleic Acids Res       Date:  2003-07-15       Impact factor: 16.971

5.  Cell shape regulates global histone acetylation in human mammary epithelial cells.

Authors:  Johanne Le Beyec; Ren Xu; Sun-Young Lee; Celeste M Nelson; Aylin Rizki; Jordi Alcaraz; Mina J Bissell
Journal:  Exp Cell Res       Date:  2007-04-27       Impact factor: 3.905

6.  N-cofilin is associated with neuronal migration disorders and cell cycle control in the cerebral cortex.

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7.  Aberrant actin cytoskeleton leads to accelerated proliferation of corneal epithelial cells in mice deficient for destrin (actin depolymerizing factor).

Authors:  Sakae Ikeda; Leslie A Cunningham; Dawnalyn Boggess; Norman Hawes; Craig D Hobson; John P Sundberg; Jürgen K Naggert; Richard S Smith; Patsy M Nishina
Journal:  Hum Mol Genet       Date:  2003-05-01       Impact factor: 6.150

Review 8.  Serum response factor: toggling between disparate programs of gene expression.

Authors:  Joseph M Miano
Journal:  J Mol Cell Cardiol       Date:  2003-06       Impact factor: 5.000

9.  Actin polymerization modulates CD44 surface expression, MMP-9 activation, and osteoclast function.

Authors:  V Samanna; T Ma; T W Mak; M Rogers; M A Chellaiah
Journal:  J Cell Physiol       Date:  2007-12       Impact factor: 6.384

10.  Cofilin phosphorylation and actin cytoskeletal dynamics regulated by rho- and Cdc42-activated LIM-kinase 2.

Authors:  T Sumi; K Matsumoto; Y Takai; T Nakamura
Journal:  J Cell Biol       Date:  1999-12-27       Impact factor: 10.539

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2.  A pathogenic relationship between a regulator of the actin cytoskeleton and serum response factor.

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Journal:  Genetics       Date:  2010-07-06       Impact factor: 4.562

3.  The role of actin depolymerizing factor in advanced glycation endproducts-induced impairment in mouse brain microvascular endothelial cells.

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4.  Destrin deletion enhances the bone loss in hindlimb suspended mice.

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Journal:  Eur J Appl Physiol       Date:  2012-07-06       Impact factor: 3.078

Review 5.  Linking actin dynamics and gene transcription to drive cellular motile functions.

Authors:  Eric N Olson; Alfred Nordheim
Journal:  Nat Rev Mol Cell Biol       Date:  2010-05       Impact factor: 94.444

6.  Serum response factor: positive and negative regulation of an epithelial gene expression network in the destrin mutant cornea.

Authors:  Sharolyn V Kawakami-Schulz; Angela M Verdoni; Shannon G Sattler; Erik Jessen; Winston W-Y Kao; Akihiro Ikeda; Sakae Ikeda
Journal:  Physiol Genomics       Date:  2014-02-18       Impact factor: 3.107

7.  Overexpression of actin-depolymerizing factor blocks oxidized low-density lipoprotein-induced mouse brain microvascular endothelial cell barrier dysfunction.

Authors:  Jun Wang; Lu Sun; Yan-Fang Si; Bao-Min Li
Journal:  Mol Cell Biochem       Date:  2012-08-29       Impact factor: 3.396

8.  Genetic modification of corneal neovascularization in Dstn (corn1) mice.

Authors:  Sharolyn V Kawakami-Schulz; Shannon G Sattler; Anna-Lisa Doebley; Akihiro Ikeda; Sakae Ikeda
Journal:  Mamm Genome       Date:  2013-08-09       Impact factor: 2.957

9.  Serum response factor is essential for the proper development of skin epithelium.

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Journal:  Mamm Genome       Date:  2010-01-03       Impact factor: 2.957

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