Literature DB >> 18379763

Application of multivariate data-analysis techniques to biomedical diagnostics based on mid-infrared spectroscopy.

Liqun Wang1, Boris Mizaikoff.   

Abstract

The objective of this contribution is to review the application of advanced multivariate data-analysis techniques in the field of mid-infrared (MIR) spectroscopic biomedical diagnosis. MIR spectroscopy is a powerful chemical analysis tool for detecting biomedically relevant constituents such as DNA/RNA, proteins, carbohydrates, lipids, etc., and even diseases or disease progression that may induce changes in the chemical composition or structure of biological systems including cells, tissues, and bio-fluids. However, MIR spectra of multiple constituents are usually characterized by strongly overlapping spectral features reflecting the complexity of biological samples. Consequently, MIR spectra of biological samples are frequently difficult to interpret by simple data-analysis techniques. Hence, with increasing complexity of the sample matrix more sophisticated mathematical and statistical data analysis routines are required for deconvoluting spectroscopic data and for providing useful results from information-rich spectroscopic signals. A large body of work relates to the combination of multivariate data-analysis techniques with MIR spectroscopy, and has been applied by a variety of research groups to biomedically relevant areas such as cancer detection and analysis, artery diseases, biomarkers, and other pathologies. The reported results indeed reveal a promising perspective for more widespread application of multivariate data analysis in assisting MIR spectroscopy as a screening or diagnostic tool in biomedical research and clinical studies. While the authors do not mean to ignore any relevant contributions to biomedical analysis across the entire electromagnetic spectrum, they confine the discussion in this contribution to the mid-infrared spectral range as a potentially very useful, yet underutilized frequency region. Selected representative examples without claiming completeness will demonstrate a range of biomedical diagnostic applications with particular emphasis on the advantageous interaction between multivariate data analysis and MIR spectroscopy.

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Year:  2008        PMID: 18379763     DOI: 10.1007/s00216-008-1989-9

Source DB:  PubMed          Journal:  Anal Bioanal Chem        ISSN: 1618-2642            Impact factor:   4.142


  16 in total

1.  Rapid detection of nasopharyngeal cancer using Raman spectroscopy and multivariate statistical analysis.

Authors:  Yongzeng Li; Wei Huang; Jianji Pan; Qing Ye; Shaojun Lin; Shangyuan Feng; Shusen Xie; Haishan Zeng; Rong Chen
Journal:  Mol Clin Oncol       Date:  2014-12-02

2.  High-mass-resolution MALDI mass spectrometry imaging of metabolites from formalin-fixed paraffin-embedded tissue.

Authors:  Alice Ly; Achim Buck; Benjamin Balluff; Na Sun; Karin Gorzolka; Annette Feuchtinger; Klaus-Peter Janssen; Peter J K Kuppen; Cornelis J H van de Velde; Gregor Weirich; Franziska Erlmeier; Rupert Langer; Michaela Aubele; Horst Zitzelsberger; Liam McDonnell; Michaela Aichler; Axel Walch
Journal:  Nat Protoc       Date:  2016-07-14       Impact factor: 13.491

3.  Infrared spectroscopy and microscopy in cancer research and diagnosis.

Authors:  Giuseppe Bellisola; Claudio Sorio
Journal:  Am J Cancer Res       Date:  2011-11-22       Impact factor: 6.166

4.  Application of Fourier transform infrared spectroscopic imaging to the study of effects of age and dietary L-arginine on aortic lesion composition in cholesterol-fed rabbits.

Authors:  Francesca Palombo; Stephanie G Cremers; Peter D Weinberg; Sergei G Kazarian
Journal:  J R Soc Interface       Date:  2008-11-04       Impact factor: 4.118

5.  Development of a univariate membrane-based mid-infrared method for protein quantitation and total lipid content analysis of biological samples.

Authors:  Ivona Strug; Christopher Utzat; Amedeo Cappione; Sara Gutierrez; Ryan Amara; Joseph Lento; Florian Capito; Romas Skudas; Elena Chernokalskaya; Timothy Nadler
Journal:  J Anal Methods Chem       Date:  2014-10-13       Impact factor: 2.193

6.  Near-infrared spectroscopy as a diagnostic tool for distinguishing between normal and malignant colorectal tissues.

Authors:  Hui Chen; Zan Lin; Lin Mo; Tong Wu; Chao Tan
Journal:  Biomed Res Int       Date:  2015-01-13       Impact factor: 3.411

7.  Using mid infrared technology as new method for the determination of the dwell time of salivary substitutes on three dimensional gingiva models.

Authors:  Karin Engelhart; Alice Popescu; Jürgen Bernhardt
Journal:  BMC Ear Nose Throat Disord       Date:  2016-03-15

8.  A rapid method for the differentiation of yeast cells grown under carbon and nitrogen-limited conditions by means of partial least squares discriminant analysis employing infrared micro-spectroscopic data of entire yeast cells.

Authors:  Julia Kuligowski; Guillermo Quintás; Christoph Herwig; Bernhard Lendl
Journal:  Talanta       Date:  2012-06-20       Impact factor: 6.057

9.  In vivo measurement of mid-infrared light scattering from human skin.

Authors:  Anna P M Michel; Sabbir Liakat; Kevin Bors; Claire F Gmachl
Journal:  Biomed Opt Express       Date:  2013-03-04       Impact factor: 3.732

10.  Imaging of Osteoarthritic Human Articular Cartilage using Fourier Transform Infrared Microspectroscopy Combined with Multivariate and Univariate Analysis.

Authors:  J Oinas; L Rieppo; M A J Finnilä; M Valkealahti; P Lehenkari; S Saarakkala
Journal:  Sci Rep       Date:  2016-07-21       Impact factor: 4.379

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