Literature DB >> 18376412

MukB acts as a macromolecular clamp in DNA condensation.

Yuanbo Cui1, Zoya M Petrushenko, Valentin V Rybenkov.   

Abstract

Correct folding of the chromosome into its highly ordered structure requires the action of condensins. The multisubunit condensins are highly conserved from bacteria to humans, and at their core they contain the characteristic V-shaped dimer of structural maintenance of chromosome proteins. The mechanism of DNA rearrangements by condensins remains unclear. Using magnetic tweezers, we show that bacterial condensin MukB acts as an ATP-modulated macromolecular assemblage in DNA condensation. Condensation occurs in a highly cooperative manner, resulting in the formation of force-resilient clusters. ATP regulates nucleation but not propagation of the clusters and seems to play a structural role. MukB clusters can further interact with each other, thereby bringing distant DNA segments together. The resulting activity has not previously been described among DNA-remodeling machines and may explain how the protein can organize the global structure of the chromosome.

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Year:  2008        PMID: 18376412     DOI: 10.1038/nsmb.1410

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  48 in total

1.  Physical and functional interaction between the condensin MukB and the decatenase topoisomerase IV in Escherichia coli.

Authors:  Ryo Hayama; Kenneth J Marians
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-09       Impact factor: 11.205

2.  Escherichia coli condensin MukB stimulates topoisomerase IV activity by a direct physical interaction.

Authors:  Yinyin Li; Nichole K Stewart; Anthony J Berger; Seychelle Vos; Allyn J Schoeffler; James M Berger; Brian T Chait; Martha G Oakley
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-04       Impact factor: 11.205

3.  A new family of bacterial condensins.

Authors:  Zoya M Petrushenko; Weifeng She; Valentin V Rybenkov
Journal:  Mol Microbiol       Date:  2011-07-18       Impact factor: 3.501

4.  Towards the architecture of the chromosomal architects.

Authors:  Valentin V Rybenkov
Journal:  Nat Struct Mol Biol       Date:  2009-02       Impact factor: 15.369

Review 5.  Dynamics of the bacterial SMC complex and SMC-like proteins involved in DNA repair.

Authors:  Peter L Graumann; Tobias Knust
Journal:  Chromosome Res       Date:  2009       Impact factor: 5.239

6.  Structural basis for the MukB-topoisomerase IV interaction and its functional implications in vivo.

Authors:  Seychelle M Vos; Nichole K Stewart; Martha G Oakley; James M Berger
Journal:  EMBO J       Date:  2013-10-04       Impact factor: 11.598

7.  Mechanics of DNA bridging by bacterial condensin MukBEF in vitro and in singulo.

Authors:  Zoya M Petrushenko; Yuanbo Cui; Weifeng She; Valentin V Rybenkov
Journal:  EMBO J       Date:  2010-01-14       Impact factor: 11.598

8.  In vitro assembly of physiological cohesin/DNA complexes.

Authors:  Itay Onn; Douglas Koshland
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-13       Impact factor: 11.205

9.  DNA-segment-capture model for loop extrusion by structural maintenance of chromosome (SMC) protein complexes.

Authors:  John F Marko; Paolo De Los Rios; Alessandro Barducci; Stephan Gruber
Journal:  Nucleic Acids Res       Date:  2019-07-26       Impact factor: 16.971

10.  Pseudomonas aeruginosa Condensins Support Opposite Differentiation States.

Authors:  Hang Zhao; April L Clevenger; Jerry W Ritchey; Helen I Zgurskaya; Valentin V Rybenkov
Journal:  J Bacteriol       Date:  2016-10-07       Impact factor: 3.490

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