Literature DB >> 18370065

Highly proficient gene targeting by homologous recombination in the human pre-B cell line Nalm-6.

Noritaka Adachi1, Aya Kurosawa, Hideki Koyama.   

Abstract

Gene targeting provides a powerful means for studying gene function by a reverse genetic approach. Despite recent rapid progress in gene knockdown technologies, gene knockout studies using human somatic cells will be of greater importance for analyzing the functions of human genes in greater detail. Although the frequency of gene targeting is typically very low in human cultured cells, we have recently shown that a human precursor B cell line, Nalm-6, exceptionally allows for high-efficiency gene targeting by homologous recombination. In addition, we have developed a quick and simplified method to construct gene-targeting vectors, which is applicable to all sequenced organisms as well as embryonic stem cells. The combination of the simplified vector construction technology and the highly efficient gene-knockout system using Nalm-6 cells has enabled us to disrupt virtually any locus of the human genome within one month. Our system will greatly facilitate gene-knockout studies in human cells.

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Year:  2008        PMID: 18370065     DOI: 10.1007/978-1-59745-232-8_2

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  10 in total

1.  Use of DT40 conditional-knockout cell lines to study chromosomal passenger protein function.

Authors:  Xavier Fant; Kumiko Samejima; Ana Carvalho; Hiromi Ogawa; Zhenjie Xu; Zuojun Yue; William C Earnshaw; Sandrine Ruchaud
Journal:  Biochem Soc Trans       Date:  2010-12       Impact factor: 5.407

2.  LEDGF/p75-independent HIV-1 replication demonstrates a role for HRP-2 and remains sensitive to inhibition by LEDGINs.

Authors:  Rik Schrijvers; Jan De Rijck; Jonas Demeulemeester; Noritaka Adachi; Sofie Vets; Keshet Ronen; Frauke Christ; Frederic D Bushman; Zeger Debyser; Rik Gijsbers
Journal:  PLoS Pathog       Date:  2012-03-01       Impact factor: 6.823

3.  Construction and applications of exon-trapping gene-targeting vectors with a novel strategy for negative selection.

Authors:  Shinta Saito; Kiyoe Ura; Miho Kodama; Noritaka Adachi
Journal:  BMC Res Notes       Date:  2015-06-30

4.  Analysis of the role of homology arms in gene-targeting vectors in human cells.

Authors:  Ayako Ishii; Aya Kurosawa; Shinta Saito; Noritaka Adachi
Journal:  PLoS One       Date:  2014-09-24       Impact factor: 3.240

5.  Dual loss of human POLQ and LIG4 abolishes random integration.

Authors:  Shinta Saito; Ryo Maeda; Noritaka Adachi
Journal:  Nat Commun       Date:  2017-07-11       Impact factor: 14.919

6.  Dynamic behavior of DNA topoisomerase IIβ in response to DNA double-strand breaks.

Authors:  Keiko Morotomi-Yano; Shinta Saito; Noritaka Adachi; Ken-Ichi Yano
Journal:  Sci Rep       Date:  2018-07-09       Impact factor: 4.379

7.  Generation of mast cells from mouse fetus: analysis of differentiation and functionality, and transcriptome profiling using next generation sequencer.

Authors:  Nobuyuki Fukuishi; Yuusuke Igawa; Tomoyo Kunimi; Hirofumi Hamano; Masao Toyota; Hironobu Takahashi; Hiromichi Kenmoku; Yasuyuki Yagi; Nobuaki Matsui; Masaaki Akagi
Journal:  PLoS One       Date:  2013-04-03       Impact factor: 3.240

8.  Restoration of mismatch repair functions in human cell line Nalm-6, which has high efficiency for gene targeting.

Authors:  Tetsuya Suzuki; Akiko Ukai; Masamitsu Honma; Noritaka Adachi; Takehiko Nohmi
Journal:  PLoS One       Date:  2013-04-15       Impact factor: 3.240

9.  Interference in DNA replication can cause mitotic chromosomal breakage unassociated with double-strand breaks.

Authors:  Mari Fujita; Hiroyuki Sasanuma; Kimiyo N Yamamoto; Hiroshi Harada; Aya Kurosawa; Noritaka Adachi; Masato Omura; Masahiro Hiraoka; Shunichi Takeda; Kouji Hirota
Journal:  PLoS One       Date:  2013-04-03       Impact factor: 3.240

10.  Impact of non-homologous end-joining deficiency on random and targeted DNA integration: implications for gene targeting.

Authors:  Susumu Iiizumi; Aya Kurosawa; Sairei So; Yasuyuki Ishii; Yuichi Chikaraishi; Ayako Ishii; Hideki Koyama; Noritaka Adachi
Journal:  Nucleic Acids Res       Date:  2008-10-03       Impact factor: 16.971

  10 in total

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