Literature DB >> 18369407

Bacterial stationary-state mutagenesis and Mammalian tumorigenesis as stress-induced cellular adaptations and the role of epigenetics.

Tv Karpinets1, Dj Greenwood, Ip Pogribny, Nf Samatova.   

Abstract

Mechanisms of cellular adaptation may have some commonalities across different organisms. Revealing these common mechanisms may provide insight in the organismal level of adaptation and suggest solutions to important problems related to the adaptation. An increased rate of mutations, referred as the mutator phenotype, and beneficial nature of these mutations are common features of the bacterial stationary-state mutagenesis and of the tumorigenic transformations in mammalian cells. We argue that these commonalities of mammalian and bacterial cells result from their stress-induced adaptation that may be described in terms of a common model. Specifically, in both organisms the mutator phenotype is activated in a subpopulation of proliferating stressed cells as a strategy to survival. This strategy is an alternative to other survival strategies, such as senescence and programmed cell death, which are also activated in the stressed cells by different subpopulations. Sustained stress-related proliferative signalling and epigenetic mechanisms play a decisive role in the choice of the mutator phenotype survival strategy in the cells. They reprogram cellular functions by epigenetic silencing of cell-cycle inhibitors, DNA repair, programmed cell death, and by activation of repetitive DNA elements. This reprogramming leads to the mutator phenotype that is implemented by error-prone cell divisions with the involvement of Y family polymerases. Studies supporting the proposed model of stress-induced cellular adaptation are discussed. Cellular mechanisms involved in the bacterial stress-induced adaptation are considered in more detail.

Entities:  

Keywords:  Adaptive mutagenesis; bacteria; cancer; epigenetic alterations; histone-like proteins; stress

Year:  2006        PMID: 18369407      PMCID: PMC2269004          DOI: 10.2174/138920206779315764

Source DB:  PubMed          Journal:  Curr Genomics        ISSN: 1389-2029            Impact factor:   2.236


  138 in total

Review 1.  Mechanisms of genome-wide hypermutation in stationary phase.

Authors:  M J Lombardo; J Torkelson; H J Bull; G J McKenzie; S M Rosenberg
Journal:  Ann N Y Acad Sci       Date:  1999-05-18       Impact factor: 5.691

Review 2.  Small non-coding RNAs, co-ordinators of adaptation processes in Escherichia coli: the RpoS paradigm.

Authors:  F Repoila; N Majdalani; S Gottesman
Journal:  Mol Microbiol       Date:  2003-05       Impact factor: 3.501

Review 3.  Small regulatory RNAs in mammals.

Authors:  John S Mattick; Igor V Makunin
Journal:  Hum Mol Genet       Date:  2005-04-15       Impact factor: 6.150

4.  Fis regulates transcriptional induction of RpoS in Salmonella enterica.

Authors:  Matthew Hirsch; Thomas Elliott
Journal:  J Bacteriol       Date:  2005-03       Impact factor: 3.490

5.  Involvement of DNA mismatch repair in stationary-phase mutagenesis during prolonged starvation of Pseudomonas putida.

Authors:  Signe Saumaa; Kairi Tarassova; Mariliis Tark; Andres Tover; Radi Tegova; Maia Kivisaar
Journal:  DNA Repair (Amst)       Date:  2006-01-18

6.  Cell cycle arrest in Era GTPase mutants: a potential growth rate-regulated checkpoint in Escherichia coli.

Authors:  R A Britton; B S Powell; S Dasgupta; Q Sun; W Margolin; J R Lupski; D L Court
Journal:  Mol Microbiol       Date:  1998-02       Impact factor: 3.501

Review 7.  Aberrant DNA methylation as a cancer-inducing mechanism.

Authors:  Manel Esteller
Journal:  Annu Rev Pharmacol Toxicol       Date:  2005       Impact factor: 13.820

8.  Stimulation of transposition of the Mycobacterium tuberculosis insertion sequence IS6110 by exposure to a microaerobic environment.

Authors:  K Ghanekar; A McBride; O Dellagostin; S Thorne; R Mooney; J McFadden
Journal:  Mol Microbiol       Date:  1999-09       Impact factor: 3.501

9.  Involvement of error-prone DNA polymerase IV in stationary-phase mutagenesis in Pseudomonas putida.

Authors:  Radi Tegova; Andres Tover; Kairi Tarassova; Mariliis Tark; Maia Kivisaar
Journal:  J Bacteriol       Date:  2004-05       Impact factor: 3.490

10.  H-NS regulates DNA repair in Shigella.

Authors:  S Palchaudhuri; B Tominna; M A Leon
Journal:  J Bacteriol       Date:  1998-10       Impact factor: 3.490

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  9 in total

1.  Computation of mutual fitness by competing bacteria.

Authors:  Juan E Keymer; Peter Galajda; Guillaume Lambert; David Liao; Robert H Austin
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-11       Impact factor: 11.205

2.  Cloning, expression, purification, crystallization and preliminary crystallographic analysis of MsDpo4: a Y-family DNA polymerase from Mycobacterium smegmatis.

Authors:  Amit Sharma; Deepak T Nair
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-06-30

3.  Stress-induced mutagenesis and complex adaptation.

Authors:  Yoav Ram; Lilach Hadany
Journal:  Proc Biol Sci       Date:  2014-10-07       Impact factor: 5.349

4.  BCR-ABL gene expression is required for its mutations in a novel KCL-22 cell culture model for acquired resistance of chronic myelogenous leukemia.

Authors:  Hongfeng Yuan; Zhiqiang Wang; Chunggang Gao; Wengang Chen; Qin Huang; Jiing-Kuan Yee; Ravi Bhatia; WenYong Chen
Journal:  J Biol Chem       Date:  2009-12-10       Impact factor: 5.157

5.  MsDpo4-a DinB Homolog from Mycobacterium smegmatis-Is an Error-Prone DNA Polymerase That Can Promote G:T and T:G Mismatches.

Authors:  Amit Sharma; Deepak T Nair
Journal:  J Nucleic Acids       Date:  2012-03-15

6.  Phenotypic and transcriptional profiling in Entamoeba histolytica reveal costs to fitness and adaptive responses associated with metronidazole resistance.

Authors:  Gil M Penuliar; Kumiko Nakada-Tsukui; Tomoyoshi Nozaki
Journal:  Front Microbiol       Date:  2015-05-05       Impact factor: 5.640

Review 7.  Mutation and Recombination Rates Vary Across Bacterial Chromosome.

Authors:  Maia Kivisaar
Journal:  Microorganisms       Date:  2019-12-21

8.  A strategically located serine residue is critical for the mutator activity of DNA polymerase IV from Escherichia coli.

Authors:  Amit Sharma; Jithesh Kottur; Naveen Narayanan; Deepak T Nair
Journal:  Nucleic Acids Res       Date:  2013-03-21       Impact factor: 16.971

9.  Experimental design to evaluate directed adaptive mutation in Mammalian cells.

Authors:  Michael Bordonaro; Christopher R Chiaro; Tobias May
Journal:  JMIR Res Protoc       Date:  2014-12-09
  9 in total

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