Literature DB >> 18369141

Evolution of eukaryotic transcription circuits.

Brian B Tuch1, Hao Li, Alexander D Johnson.   

Abstract

The gradual modification of transcription circuits over evolutionary time scales is an important source of the diversity of life. Over the past decade, studies in animals have shown how seemingly small molecular changes in gene regulation can have large effects on morphology and physiology and how selective pressures can act on these changes. More recently, genome-wide studies, particularly those in single-cell yeasts, have uncovered evidence of extensive transcriptional rewiring, indicating that even closely related organisms regulate their genes using markedly different circuitries.

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Year:  2008        PMID: 18369141     DOI: 10.1126/science.1152398

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  81 in total

1.  Reshaping of global gene expression networks and sex-biased gene expression by integration of a young gene.

Authors:  Sidi Chen; Xiaochun Ni; Benjamin H Krinsky; Yong E Zhang; Maria D Vibranovski; Kevin P White; Manyuan Long
Journal:  EMBO J       Date:  2012-04-27       Impact factor: 11.598

2.  Transcription factor function and promoter architecture govern the evolution of bacterial regulons.

Authors:  J Christian Perez; Eduardo A Groisman
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-27       Impact factor: 11.205

3.  Degree dependence in rates of transcription factor evolution explains the unusual structure of transcription networks.

Authors:  Alexander J Stewart; Robert M Seymour; Andrew Pomiankowski
Journal:  Proc Biol Sci       Date:  2009-04-08       Impact factor: 5.349

4.  The evolution of complex gene regulation by low-specificity binding sites.

Authors:  Alexander J Stewart; Joshua B Plotkin
Journal:  Proc Biol Sci       Date:  2013-08-14       Impact factor: 5.349

5.  Low-affinity transcription factor binding sites shape morphogen responses and enhancer evolution.

Authors:  Andrea I Ramos; Scott Barolo
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-11-11       Impact factor: 6.237

6.  Dampened Hedgehog signaling but normal Wnt signaling in zebrafish without cilia.

Authors:  Peng Huang; Alexander F Schier
Journal:  Development       Date:  2009-09       Impact factor: 6.868

Review 7.  Coevolution of morphology and virulence in Candida species.

Authors:  Delma S Thompson; Patricia L Carlisle; David Kadosh
Journal:  Eukaryot Cell       Date:  2011-07-15

8.  Evolutionary divergence of the sex-determining gene MID uncoupled from the transition to anisogamy in volvocine algae.

Authors:  Sa Geng; Ayano Miyagi; James G Umen
Journal:  Development       Date:  2018-04-09       Impact factor: 6.868

9.  Global analysis of Cdk1 substrate phosphorylation sites provides insights into evolution.

Authors:  Liam J Holt; Brian B Tuch; Judit Villén; Alexander D Johnson; Steven P Gygi; David O Morgan
Journal:  Science       Date:  2009-09-25       Impact factor: 47.728

10.  Transcription factor RFX1 is crucial for maintenance of genome integrity in Fusarium graminearum.

Authors:  Kyunghun Min; Hokyoung Son; Jae Yun Lim; Gyung Ja Choi; Jin-Cheol Kim; Steven D Harris; Yin-Won Lee
Journal:  Eukaryot Cell       Date:  2014-01-24
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