Literature DB >> 18369140

Complex riboswitches.

Ronald R Breaker1.   

Abstract

Using simple biochemical tricks, metabolite-binding riboswitches take on gene control functions that have long been thought to be the work of protein factors. Although modern riboswitches might be the last holdouts of primitive genetic elements, some are capable of sensory and regulatory feats that are competitive with their protein counterparts.

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Year:  2008        PMID: 18369140     DOI: 10.1126/science.1152621

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  48 in total

1.  Using simulations and kinetic network models to reveal the dynamics and functions of riboswitches.

Authors:  Jong-Chin Lin; Jeseong Yoon; Changbong Hyeon; D Thirumalai
Journal:  Methods Enzymol       Date:  2015-02-03       Impact factor: 1.600

2.  A binding resolution.

Authors:  Alan M Jones; Michael R Sussman
Journal:  Plant Physiol       Date:  2009-03-13       Impact factor: 8.340

3.  Nonlocal helix formation is key to understanding S-adenosylmethionine-1 riboswitch function.

Authors:  Paul C Whitford; Alexander Schug; John Saunders; Scott P Hennelly; José N Onuchic; Kevin Y Sanbonmatsu
Journal:  Biophys J       Date:  2009-01       Impact factor: 4.033

4.  RNA nanotechnology for computer design and in vivo computation.

Authors:  Meikang Qiu; Emil Khisamutdinov; Zhengyi Zhao; Cheryl Pan; Jeong-Woo Choi; Neocles B Leontis; Peixuan Guo
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2013-09-02       Impact factor: 4.226

Review 5.  RNA folding: thermodynamic and molecular descriptions of the roles of ions.

Authors:  David E Draper
Journal:  Biophys J       Date:  2008-10-03       Impact factor: 4.033

6.  Crystal structure of an RluF-RNA complex: a base-pair rearrangement is the key to selectivity of RluF for U2604 of the ribosome.

Authors:  Akram Alian; Andrew DeGiovanni; Sarah L Griner; Janet S Finer-Moore; Robert M Stroud
Journal:  J Mol Biol       Date:  2009-03-17       Impact factor: 5.469

7.  A variant riboswitch aptamer class for S-adenosylmethionine common in marine bacteria.

Authors:  Elena Poiata; Michelle M Meyer; Tyler D Ames; Ronald R Breaker
Journal:  RNA       Date:  2009-09-23       Impact factor: 4.942

8.  Comparisons between chemical mapping and binding to isoenergetic oligonucleotide microarrays reveal unexpected patterns of binding to the Bacillus subtilis RNase P RNA specificity domain.

Authors:  Ruiting Liang; Elzbieta Kierzek; Ryszard Kierzek; Douglas H Turner
Journal:  Biochemistry       Date:  2010-09-21       Impact factor: 3.162

9.  RNA Structural Modules Control the Rate and Pathway of RNA Folding and Assembly.

Authors:  Brant Gracia; Yi Xue; Namita Bisaria; Daniel Herschlag; Hashim M Al-Hashimi; Rick Russell
Journal:  J Mol Biol       Date:  2016-07-22       Impact factor: 5.469

10.  Design principles for riboswitch function.

Authors:  Chase L Beisel; Christina D Smolke
Journal:  PLoS Comput Biol       Date:  2009-04-17       Impact factor: 4.475

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