Literature DB >> 18368366

Computational exploration of neuron and neural network models in neurobiology.

Astrid A Prinz1.   

Abstract

The electrical activity of individual neurons and neuronal networks is shaped by the complex interplay of a large number of non-linear processes, including the voltage-dependent gating of ion channels and the activation of synaptic receptors. These complex dynamics make it difficult to understand how individual neuron or network parameters-such as the number of ion channels of a given type in a neuron's membrane or the strength of a particular synapse-influence neural system function. Systematic exploration of cellular or network model parameter spaces by computational brute force can overcome this difficulty and generate comprehensive data sets that contain information about neuron or network behavior for many different combinations of parameters. Searching such data sets for parameter combinations that produce functional neuron or network output provides insights into how narrowly different neural system parameters have to be tuned to produce a desired behavior. This chapter describes the construction and analysis of databases of neuron or neuronal network models and describes some of the advantages and downsides of such exploration methods.

Mesh:

Year:  2007        PMID: 18368366     DOI: 10.1007/978-1-59745-520-6_10

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  5 in total

1.  Animal-to-animal variability of connection strength in the leech heartbeat central pattern generator.

Authors:  Rebecca C Roffman; Brian J Norris; Ronald L Calabrese
Journal:  J Neurophysiol       Date:  2011-12-21       Impact factor: 2.714

Review 2.  Coping with variability in small neuronal networks.

Authors:  Ronald L Calabrese; Brian J Norris; Angela Wenning; Terrence M Wright
Journal:  Integr Comp Biol       Date:  2011-06-30       Impact factor: 3.326

3.  A modeling framework for deriving the structural and functional architecture of a short-term memory microcircuit.

Authors:  Dimitry Fisher; Itsaso Olasagasti; David W Tank; Emre R F Aksay; Mark S Goldman
Journal:  Neuron       Date:  2013-09-04       Impact factor: 17.173

4.  Constancy and variability in the output of a central pattern generator.

Authors:  Brian J Norris; Angela Wenning; Terrence Michael Wright; Ronald L Calabrese
Journal:  J Neurosci       Date:  2011-03-23       Impact factor: 6.167

5.  Dynamic Input Conductances Shape Neuronal Spiking

Authors:  Guillaume Drion; Alessio Franci; Julie Dethier; Rodolphe Sepulchre
Journal:  eNeuro       Date:  2015-03-25
  5 in total

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