Literature DB >> 18363199

A novel group of multi-GAP-domain proteins.

Yibing Ruan1, Christoph W Sensen, Frans A van der Hoorn.   

Abstract

The Rho GTPase-activating proteins (RhoGAPs) play an essential role in regulating various cellular processes. Rat tGAP1 is the first reported protein that has multiple GAP domains. It is exclusively expressed in male germ cells. However, tGAP1 does not possess GAP activities in vitro. No tGAP1 homology has been identified in other species. In this study, we searched the genomic databases and identified many genes whose protein products possess 2-4 GAP domains in rat, mouse and dog. These genes all showed sequence similarity to tGAP1. The rat tGAP gene loci all locate on chromosome 2 and are all expressed in testes in RT-PCR analysis. The mouse tGAP gene loci also clustered on chromosome 3 but RT-PCR analysis showed most are pseudogene loci. Multiple sequence alignment showed that many conserved residues of the "arginine finger" motif within the GAP domains of predicted tGAP proteins have mutated, suggesting that tGAP proteins do not possess GAP activity. We also elucidated the evolutionary relations among the rat tGAP genes. Based on the phylogenetic analysis data, we proposed that tGAP genes and Arhgap20 genes have a common ancestor.

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Year:  2008        PMID: 18363199      PMCID: PMC5241158          DOI: 10.1002/mrd.20896

Source DB:  PubMed          Journal:  Mol Reprod Dev        ISSN: 1040-452X            Impact factor:   2.609


  23 in total

1.  RanGAP mediates GTP hydrolysis without an arginine finger.

Authors:  Michael J Seewald; Carolin Körner; Alfred Wittinghofer; Ingrid R Vetter
Journal:  Nature       Date:  2002-02-07       Impact factor: 49.962

2.  T-Coffee: A novel method for fast and accurate multiple sequence alignment.

Authors:  C Notredame; D G Higgins; J Heringa
Journal:  J Mol Biol       Date:  2000-09-08       Impact factor: 5.469

3.  Rho family GTPase Rnd2 interacts and co-localizes with MgcRacGAP in male germ cells.

Authors:  Nathalie Naud; Aminata Touré; Jianfeng Liu; Charles Pineau; Laurence Morin; Olivier Dorseuil; Denise Escalier; Pierre Chardin; Gérard Gacon
Journal:  Biochem J       Date:  2003-05-15       Impact factor: 3.857

Review 4.  The small GTPase Ran: interpreting the signs.

Authors:  B Booth Quimby; Mary Dasso
Journal:  Curr Opin Cell Biol       Date:  2003-06       Impact factor: 8.382

5.  A novel testicular RhoGAP-domain protein induces apoptosis.

Authors:  M Hossein Modarressi; Min Cheng; Heide A Tarnasky; Nathalie Lamarche-Vane; Dirk G de Rooij; Yibing Ruan; Frans A van der Hoorn
Journal:  Biol Reprod       Date:  2004-08-11       Impact factor: 4.285

Review 6.  Repositioning-dependent fate of duplicate genes.

Authors:  Sergei N Rodin; Dmitri V Parkhomchuk; Andrei S Rodin; Gerald P Holmquist; Arthur D Riggs
Journal:  DNA Cell Biol       Date:  2005-09       Impact factor: 3.311

7.  RA-RhoGAP, Rap-activated Rho GTPase-activating protein implicated in neurite outgrowth through Rho.

Authors:  Tomohiro Yamada; Toshiaki Sakisaka; Shu Hisata; Takeshi Baba; Yoshimi Takai
Journal:  J Biol Chem       Date:  2005-07-13       Impact factor: 5.157

Review 8.  Human RhoGAP domain-containing proteins: structure, function and evolutionary relationships.

Authors:  Jeremy Peck; Gilbert Douglas; Catherine H Wu; Peter D Burbelo
Journal:  FEBS Lett       Date:  2002-09-25       Impact factor: 4.124

Review 9.  Regulation of nuclear import and export by the GTPase Ran.

Authors:  Susanne M Steggerda; Bryce M Paschal
Journal:  Int Rev Cytol       Date:  2002

10.  Structure at 1.65 A of RhoA and its GTPase-activating protein in complex with a transition-state analogue.

Authors:  K Rittinger; P A Walker; J F Eccleston; S J Smerdon; S J Gamblin
Journal:  Nature       Date:  1997-10-16       Impact factor: 49.962

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