Literature DB >> 18358468

Prediction and characterisation of a highly conserved, remote and cAMP responsive enhancer that regulates Msx1 gene expression in cardiac neural crest and outflow tract.

Kerry Ann Miller1, Scott Davidson, Angela Liaros, John Barrow, Marissa Lear, Danielle Heine, Stefan Hoppler, Alasdair MacKenzie.   

Abstract

Double knockouts of the Msx1 and Msx2 genes in the mouse result in severe cardiac outflow tract malformations similar to those frequently found in newborn infants. Despite the known role of the Msx genes in cardiac formation little is known of the regulatory systems (ligand receptor, signal transduction and protein-DNA interactions) that regulate the tissue-specific expression of the Msx genes in mammals during the formation of the outflow tract. In the present study we have used a combination of multi-species comparative genomics, mouse transgenic analysis and in-situ hybridisation to predict and validate the existence of a remote ultra-conserved enhancer that supports the expression of the Msx1 gene in migrating mouse cardiac neural crest and the outflow tract primordia. Furthermore, culturing of embryonic explants derived from transgenic lines with agonists of the PKC and PKA signal transduction systems demonstrates that this remote enhancer is influenced by PKA but not PKC dependent gene regulatory systems. These studies demonstrate the efficacy of combining comparative genomics and transgenic analyses and provide a platform for the study of the possible roles of Msx gene mis-regulation in the aetiology of congenital heart malformation.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18358468     DOI: 10.1016/j.ydbio.2008.02.016

Source DB:  PubMed          Journal:  Dev Biol        ISSN: 0012-1606            Impact factor:   3.582


  10 in total

1.  Evidence of uneven selective pressure on different subsets of the conserved human genome; implications for the significance of intronic and intergenic DNA.

Authors:  Scott Davidson; Andrew Starkey; Alasdair MacKenzie
Journal:  BMC Genomics       Date:  2009-12-16       Impact factor: 3.969

2.  Differential activity by polymorphic variants of a remote enhancer that supports galanin expression in the hypothalamus and amygdala: implications for obesity, depression and alcoholism.

Authors:  Scott Davidson; Marissa Lear; Lynne Shanley; Benjamin Hing; Amanda Baizan-Edge; Annika Herwig; John P Quinn; Gerome Breen; Peter McGuffin; Andrew Starkey; Perry Barrett; Alasdair MacKenzie
Journal:  Neuropsychopharmacology       Date:  2011-06-29       Impact factor: 7.853

3.  A polymorphism associated with depressive disorders differentially regulates brain derived neurotrophic factor promoter IV activity.

Authors:  Benjamin Hing; Scott Davidson; Marrisa Lear; Gerome Breen; John Quinn; Peter McGuffin; Alasdair MacKenzie
Journal:  Biol Psychiatry       Date:  2012-01-20       Impact factor: 13.382

4.  Long-range regulatory synergy is required to allow control of the TAC1 locus by MEK/ERK signalling in sensory neurones.

Authors:  Lynne Shanley; Scott Davidson; Marissa Lear; Anil Kumar Thotakura; Iain Joseph McEwan; Ruth A Ross; Alasdair MacKenzie
Journal:  Neurosignals       Date:  2010-12-16

Review 5.  Exploring the effects of polymorphisms on cis-regulatory signal transduction response.

Authors:  Alasdair MacKenzie; Benjamin Hing; Scott Davidson
Journal:  Trends Mol Med       Date:  2012-12-19       Impact factor: 11.951

6.  Allele-specific differences in activity of a novel cannabinoid receptor 1 (CNR1) gene intronic enhancer in hypothalamus, dorsal root ganglia, and hippocampus.

Authors:  Gemma Nicoll; Scott Davidson; Lynne Shanley; Ben Hing; Marissa Lear; Peter McGuffin; Ruth Ross; Alasdair MacKenzie
Journal:  J Biol Chem       Date:  2012-02-23       Impact factor: 5.157

7.  Understanding the Dynamics of Gene Regulatory Systems; Characterisation and Clinical Relevance of cis-Regulatory Polymorphisms.

Authors:  Philip Cowie; Ruth Ross; Alasdair MacKenzie
Journal:  Biology (Basel)       Date:  2013-01-09

8.  Characterization of Transcriptional Repressor Gene MSX1 Variations for Possible Associations with Congenital Heart Diseases.

Authors:  Fei-Feng Li; Ying Han; Shuai Shi; Xia Li; Xi-Dong Zhu; Jing Zhou; Qing-Liang Shao; Xue-Qi Li; Shu-Lin Liu
Journal:  PLoS One       Date:  2015-11-10       Impact factor: 3.240

9.  Analysis of the effects of depression associated polymorphisms on the activity of the BICC1 promoter in amygdala neurones.

Authors:  S Davidson; L Shanley; P Cowie; M Lear; P McGuffin; J P Quinn; P Barrett; A MacKenzie
Journal:  Pharmacogenomics J       Date:  2015-10-06       Impact factor: 3.550

10.  Perspective: Quality Versus Quantity; Is It Important to Assess the Role of Enhancers in Complex Disease from an In Vivo Perspective?

Authors:  Andrew R McEwan; Alasdair MacKenzie
Journal:  Int J Mol Sci       Date:  2020-10-23       Impact factor: 5.923

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.