Literature DB >> 18353677

Fast projection matching for cryo-electron microscopy image reconstruction.

Leandro Farias Estrozi1, Jorge Navaza.   

Abstract

A new FFT-accelerated projection matching method is presented and tested. The electron microscopy images are represented by their Fourier-Bessel transforms and the 3D model by its expansion in spherical harmonics, or more specifically in terms of symmetry-adapted functions. The rotational and translational properties of these representations are used to quickly access all the possible 2D projections of the 3D model, which allow an exhaustive inspection of the whole five-dimensional domain of parameters associated to each particle.

Mesh:

Year:  2008        PMID: 18353677     DOI: 10.1016/j.jsb.2008.01.014

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  7 in total

1.  Reconstruction from limited single-particle diffraction data via simultaneous determination of state, orientation, intensity, and phase.

Authors:  Jeffrey J Donatelli; James A Sethian; Peter H Zwart
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-26       Impact factor: 11.205

2.  Structure of ATP citrate lyase and the origin of citrate synthase in the Krebs cycle.

Authors:  Koen H G Verschueren; Clement Blanchet; Jan Felix; Ann Dansercoer; Dirk De Vos; Yehudi Bloch; Jozef Van Beeumen; Dmitri Svergun; Irina Gutsche; Savvas N Savvides; Kenneth Verstraete
Journal:  Nature       Date:  2019-04-03       Impact factor: 49.962

3.  Cryo-electron Microscopy Structure of the Native Prototype Foamy Virus Glycoprotein and Virus Architecture.

Authors:  Grégory Effantin; Leandro F Estrozi; Nick Aschman; Patricia Renesto; Nicole Stanke; Dirk Lindemann; Guy Schoehn; Winfried Weissenhorn
Journal:  PLoS Pathog       Date:  2016-07-11       Impact factor: 6.823

4.  Structural basis of GM-CSF and IL-2 sequestration by the viral decoy receptor GIF.

Authors:  Jan Felix; Eaazhisai Kandiah; Steven De Munck; Yehudi Bloch; Gydo C P van Zundert; Kris Pauwels; Ann Dansercoer; Katka Novanska; Randy J Read; Alexandre M J J Bonvin; Bjorn Vergauwen; Kenneth Verstraete; Irina Gutsche; Savvas N Savvides
Journal:  Nat Commun       Date:  2016-11-07       Impact factor: 14.919

5.  Structural insights into ATP hydrolysis by the MoxR ATPase RavA and the LdcI-RavA cage-like complex.

Authors:  Matthew Jessop; Benoit Arragain; Roger Miras; Angélique Fraudeau; Karine Huard; Maria Bacia-Verloop; Patrice Catty; Jan Felix; Hélène Malet; Irina Gutsche
Journal:  Commun Biol       Date:  2020-01-28

6.  Location of the dsRNA-dependent polymerase, VP1, in rotavirus particles.

Authors:  Leandro F Estrozi; Ethan C Settembre; Gaël Goret; Brian McClain; Xing Zhang; James Z Chen; Nikolaus Grigorieff; Stephen C Harrison
Journal:  J Mol Biol       Date:  2012-10-23       Impact factor: 5.469

7.  Assembly principles of a unique cage formed by hexameric and decameric E. coli proteins.

Authors:  Hélène Malet; Kaiyin Liu; Majida El Bakkouri; Sze Wah Samuel Chan; Gregory Effantin; Maria Bacia; Walid A Houry; Irina Gutsche
Journal:  Elife       Date:  2014-08-05       Impact factor: 8.140

  7 in total

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