Literature DB >> 18351982

Crystallization and melting of bacteria colonies and Brownian bugs.

Francisco Ramos1, Cristóbal López, Emilio Hernández-García, Miguel A Muñoz.   

Abstract

Motivated by the existence of remarkably ordered cluster arrays of bacteria colonies growing in Petri dishes and related problems, we study the spontaneous emergence of clustering and patterns in a simple nonequilibrium system: the individual-based interacting Brownian bug model. We map this discrete model into a continuous Langevin equation which is the starting point for our extensive numerical analyses. For the two-dimensional case we report on the spontaneous generation of localized clusters of activity as well as a melting-freezing transition from a disordered or isotropic phase to an ordered one characterized by hexagonal patterns. We study in detail the analogies and differences with the well-established Kosterlitz-Thouless-Halperin-Nelson-Young theory of equilibrium melting, as well as with another competing theory. For that, we study translational and orientational correlations and perform a careful defect analysis. We find a nonstandard one-stage, defect-mediated transition whose nature is only partially elucidated.

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Year:  2008        PMID: 18351982     DOI: 10.1103/PhysRevE.77.021102

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  2 in total

1.  Eco-evolutionary Model of Rapid Phenotypic Diversification in Species-Rich Communities.

Authors:  Paula Villa Martín; Jorge Hidalgo; Rafael Rubio de Casas; Miguel A Muñoz
Journal:  PLoS Comput Biol       Date:  2016-10-13       Impact factor: 4.475

2.  Species competition: coexistence, exclusion and clustering.

Authors:  Emilio Hernández-García; Cristóbal López; Simone Pigolotti; Ken H Andersen
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2009-08-28       Impact factor: 4.226

  2 in total

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