Literature DB >> 18351962

Comparison of the serial and parallel algorithms of generalized ensemble simulations: an analytical approach.

Sanghyun Park1.   

Abstract

This paper addresses issues related to weights and acceptance rates in generalized ensemble simulations, while comparing two algorithms: serial (e.g., simulated tempering or expanded ensemble method) and parallel (e.g., parallel tempering or replica exchange). We derive a cumulant approximation for weights and discuss its effectiveness in practical applications. We compare the acceptance rates of the serial and parallel algorithms and prove that the serial algorithm always has higher acceptance rates. The duality between forward and backward transitions plays a crucial role in the derivations throughout the paper.

Year:  2008        PMID: 18351962     DOI: 10.1103/PhysRevE.77.016709

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  8 in total

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  8 in total

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