Literature DB >> 18351960

Using force covariance to derive effective stochastic interactions in dissipative particle dynamics.

Anders Eriksson1, Martin Nilsson Jacobi, Johan Nyström, Kolbjørn Tunstrøm.   

Abstract

There exist methods for determining effective conservative interactions in coarse-grained particle-based mesoscopic simulations. The resulting models can be used to capture thermal equilibrium behavior, but the model system we study does not correctly represent transport properties. We suggest the use of force covariance to determine the full functional form of dissipative and stochastic interactions. We show that a combination of the RDF and a force covariance function can be used to determine all interactions in dissipative particle dynamics (DPD). Furthermore, we use the method to test whether the effective interactions in DPD can be adjusted to produce a force covariance consistent with the projection of a microscopic Lennard-Jones simulation. The results indicate that the DPD ansatz may not be consistent with the underlying microscopic dynamics. We discuss how this result relates to theoretical studies reported in the literature.

Year:  2008        PMID: 18351960     DOI: 10.1103/PhysRevE.77.016707

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  2 in total

1.  Direct construction of mesoscopic models from microscopic simulations.

Authors:  Huan Lei; Bruce Caswell; George Em Karniadakis
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2010-02-16

Review 2.  Bottom-Up Coarse-Grained Modeling of DNA.

Authors:  Tiedong Sun; Vishal Minhas; Nikolay Korolev; Alexander Mirzoev; Alexander P Lyubartsev; Lars Nordenskiöld
Journal:  Front Mol Biosci       Date:  2021-03-17
  2 in total

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