Literature DB >> 18351877

Observation of a dynamic crossover in RNA hydration water which triggers a dynamic transition in the biopolymer.

Xiang-Qiang Chu1, Emiliano Fratini, Piero Baglioni, Antonio Faraone, Sow-Hsin Chen.   

Abstract

High-resolution quasielastic neutron scattering spectroscopy was used to measure H2O and D2O hydrated RNA samples. The contribution of scattering from RNA was subtracted out by taking the difference of the signals between the two samples. The measurements were made at a series of temperatures from 270 K down to 180 K. The relaxing-cage model was used to analyze the difference quasielastic spectra. We observed clear evidence of a fragile-to-strong dynamic crossover (FSC) at TL=220 K in RNA hydration water. We further show that the mean-square displacements of the hydrogen atoms in both RNA and its hydration water exhibit a sharp change in slope at approximately the same temperature 220 K. This latter fact suggests that the dynamic transition in RNA is triggered by the abrupt change of mobility of the hydration water at its FSC temperature.

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Year:  2008        PMID: 18351877     DOI: 10.1103/PhysRevE.77.011908

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  6 in total

1.  Dynamics of biological macromolecules: not a simple slaving by hydration water.

Authors:  S Khodadadi; J H Roh; A Kisliuk; E Mamontov; M Tyagi; S A Woodson; R M Briber; A P Sokolov
Journal:  Biophys J       Date:  2010-04-07       Impact factor: 4.033

2.  Dynamics of tRNA at different levels of hydration.

Authors:  J H Roh; R M Briber; A Damjanovic; D Thirumalai; S A Woodson; A P Sokolov
Journal:  Biophys J       Date:  2009-04-08       Impact factor: 4.033

3.  Mean-squared atomic displacements in hydrated lysozyme, native and denatured.

Authors:  Eugene Mamontov; Hugh O'Neill; Qiu Zhang
Journal:  J Biol Phys       Date:  2010-01-13       Impact factor: 1.365

4.  Elastic Scattering Spectroscopy (ESS): an Instrument-Concept for Dynamics of Complex (Bio-) Systems From Elastic Neutron Scattering.

Authors:  Antonio Benedetto; Gordon J Kearley
Journal:  Sci Rep       Date:  2016-10-05       Impact factor: 4.379

5.  Slowdown of Interhelical Motions Induces a Glass Transition in RNA.

Authors:  Aaron T Frank; Qi Zhang; Hashim M Al-Hashimi; Ioan Andricioaei
Journal:  Biophys J       Date:  2015-06-16       Impact factor: 4.033

6.  Dynamics from elastic neutron-scattering via direct measurement of the running time-integral of the van Hove distribution function.

Authors:  Antonio Benedetto; Gordon J Kearley
Journal:  Sci Rep       Date:  2019-08-02       Impact factor: 4.379

  6 in total

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