Literature DB >> 18348525

Mechanism of intramolecular electron transfer in the photoexcited Zn-substituted cytochrome c: theoretical and experimental perspective.

Yuichi Tokita1, Jusuke Shimura, Hiroshi Nakajima, Yoshio Goto, Yoshihito Watanabe.   

Abstract

Photoinduced electron transfer (ET) in zinc-substituted cytochrome c (Zn-cyt c) has been utilized in many studies on the long-range ET in protein. Attempting to understand its ET mechanism in terms of electronic structure of the molecule, we have calculated an all-electron wave function for the ground-state of Zn-cyt c on the basis of density functional theory (DFT). The four molecular orbitals (MOs) responsible for excitation by UV-vis light (Gouterman's 4-orbitals) are assigned on the basis of the excited states of chromophore model for Zn-porphine complex calculated with the time-dependent DFT method. ET rates between each Gouterman's 4-orbitals and other MOs were estimated using Fermi's golden rule. It appeared that the two occupied MOs of the 4-orbitals show exclusively higher ET rate from/to particular MOs that localize on outermost amino acid residues (Lys 7 or Asn 54), respectively, whereas ET rates involving the two unoccupied MOs of the 4-orbitals are much slower. These results imply that the intramolecular ET in photoexcited Zn-cyt c is governed by the hole transfer through occupied MOs. The couplings of MOs between zinc porphyrin core and specific amino acid residues on the protein surface have been demonstrated in Zn-cyt c immobilized on an Au electrode via carboxylic acid group-terminated self-assembled monolayer. The Zn-cyt c-modified electrode showed photocurrents responsible for photoillumination. The action spectrum of the photocurrent was identical with the absorption spectrum of Zn-cyt c, indicating photoinduced electron conduction via occupied MOs. The voltage dependence of the photocurrent appeared to be linear and bidirectional like a photoconductor, which strongly supports the intramolecular ET mechanism in Zn-cyt c proposed on the basis of the theoretical calculations.

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Year:  2008        PMID: 18348525     DOI: 10.1021/ja711324t

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  2 in total

1.  Orbital-resolved visualization of single-molecule photocurrent channels.

Authors:  Miyabi Imai-Imada; Hiroshi Imada; Kuniyuki Miwa; Yusuke Tanaka; Kensuke Kimura; Inhae Zoh; Rafael B Jaculbia; Hiroko Yoshino; Atsuya Muranaka; Masanobu Uchiyama; Yousoo Kim
Journal:  Nature       Date:  2022-03-30       Impact factor: 49.962

2.  EPR spectroscopy and electrospray ionization mass spectrometry reveal distinctive features of the iron site in leukocyte 12-lipoxygenase.

Authors:  Johanna Rapp; Shu Xu; Allan M Sharp; Wendell P Griffith; Yong-Wah Kim; Max O Funk
Journal:  Arch Biochem Biophys       Date:  2009-08-14       Impact factor: 4.013

  2 in total

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