Literature DB >> 18347752

Novelty and spatio-temporal heterogeneity in the bacterial diversity of hypersaline Lake Tebenquiche (Salar de Atacama).

Cecilia Demergasso1, Lorena Escudero, Emilio O Casamayor, Guillermo Chong, Vanessa Balagué, Carlos Pedrós-Alió.   

Abstract

Lake Tebenquiche is one of the largest saline water bodies in the Salar de Atacama at 2,500 m above sea level in northeastern Chile. Bacteria inhabiting there have to deal with extreme changes in salinity, temperature and UV dose (i.e., high environmental dissimilarity in the physical landscape). We analyzed the bacterioplankton structure of this lake by 16S rRNA gene analyses along a spatio-temporal survey. The bacterial assemblage within the lake was quite heterogeneous both in space and time. Salinity changed both in space and time ranging between 1 and 30% (w/v), and total abundances of planktonic prokaryotes in the different sampling points within the lake ranged between two and nine times 10(6) cells mL(-1). Community composition changed accordingly to the particular salinity of each point as depicted by genetic fingerprinting analyses (denaturing gradient gel electrophoresis), showing a high level of variation in species composition from place to place (beta-diversity). Three selected sites were analyzed in more detail by clone libraries. We observed a predominance of Bacteroidetes (about one third of the clones) and Gammaproteobacteria (another third) with respect to all the other bacterial groups. The diversity of Bacteroidetes sequences was large and showed a remarkable degree of novelty. Bacteroidetes formed at least four clusters with no cultured relatives in databases and rather distantly related to any known 16S rRNA sequence. Within this phylum, a rich and diverse presence of Salinibacter relatives was found in the saltiest part of the lake. Lake Tebenquiche included several novel microorganisms of environmental importance and appeared as a large unexplored reservoir of unknown bacteria.

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Year:  2008        PMID: 18347752     DOI: 10.1007/s00792-008-0153-y

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  31 in total

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Authors:  B L Maidak; J R Cole; T G Lilburn; C T Parker; P R Saxman; J M Stredwick; G M Garrity; B Li; G J Olsen; S Pramanik; T M Schmidt; J M Tiedje
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Taxonomic study of extreme halophilic archaea isolated from the "Salar de Atacama", Chile.

Authors:  C Lizama; M Monteoliva-Sánchez; B Prado; A Ramos-Cormenzana; J Weckesser; V Campos
Journal:  Syst Appl Microbiol       Date:  2001-11       Impact factor: 4.022

3.  Changes in archaeal, bacterial and eukaryal assemblages along a salinity gradient by comparison of genetic fingerprinting methods in a multipond solar saltern.

Authors:  Emilio O Casamayor; Ramon Massana; Susana Benlloch; Lise Øvreås; Beatriz Díez; Victoria J Goddard; Josep M Gasol; Ian Joint; Francisco Rodríguez-Valera; Carlos Pedrós-Alió
Journal:  Environ Microbiol       Date:  2002-06       Impact factor: 5.491

4.  High-diversity biofilm for the oxidation of sulfide-containing effluents.

Authors:  I Ferrera; R Massana; E O Casamayor; V Balagué; O Sánchez; C Pedrós-Alió; J Mas
Journal:  Appl Microbiol Biotechnol       Date:  2004-03-02       Impact factor: 4.813

5.  Microbial diversity in Maras salterns, a hypersaline environment in the Peruvian Andes.

Authors:  Lenin Maturrano; Fernando Santos; Ramon Rosselló-Mora; Josefa Antón
Journal:  Appl Environ Microbiol       Date:  2006-06       Impact factor: 4.792

6.  Diversity of planktonic photoautotrophic microorganisms along a salinity gradient as depicted by microscopy, flow cytometry, pigment analysis and DNA-based methods.

Authors:  Marta Estrada; Peter Henriksen; Josep M Gasol; Emilio O Casamayor; Carlos Pedrós-Alió
Journal:  FEMS Microbiol Ecol       Date:  2004-08-01       Impact factor: 4.194

7.  Salinibacter ruber gen. nov., sp. nov., a novel, extremely halophilic member of the Bacteria from saltern crystallizer ponds.

Authors:  Josefa Antón; Aharon Oren; Susana Benlloch; Francisco Rodríguez-Valera; Rudolf Amann; Ramón Rosselló-Mora
Journal:  Int J Syst Evol Microbiol       Date:  2002-03       Impact factor: 2.747

8.  Genetic diversity in Sargasso Sea bacterioplankton.

Authors:  S J Giovannoni; T B Britschgi; C L Moyer; K G Field
Journal:  Nature       Date:  1990-05-03       Impact factor: 49.962

9.  Prokaryotic genetic diversity throughout the salinity gradient of a coastal solar saltern.

Authors:  Susana Benlloch; Arantxa López-López; Emilio O Casamayor; Lise Øvreås; Victoria Goddard; Frida Lise Daae; Gary Smerdon; Ramón Massana; Ian Joint; Frede Thingstad; Carlos Pedrós-Alió; Francisco Rodríguez-Valera
Journal:  Environ Microbiol       Date:  2002-06       Impact factor: 5.491

10.  Numerical taxonomy of moderately halophilic gram-positive cocci isolated from the Salar de Atacama (Chile).

Authors:  M J Valderrama; B Prado; A del Moral; R Ríos; A Ramos-Cormenzana; V Campos
Journal:  Microbiologia       Date:  1991-06
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  40 in total

1.  Influence of salinity on the bacterial community composition in Lake Bosten, a large oligosaline lake in arid northwestern China.

Authors:  Xiangming Tang; Guijuan Xie; Keqiang Shao; Yuangao Chen; Guang Gao
Journal:  Appl Environ Microbiol       Date:  2012-04-20       Impact factor: 4.792

2.  A novel subaerial Dunaliella species growing on cave spiderwebs in the Atacama Desert.

Authors:  A Azúa-Bustos; C González-Silva; L Salas; R E Palma; R Vicuña
Journal:  Extremophiles       Date:  2010-07-10       Impact factor: 2.395

3.  Diversity and activity of cultivable aerobic planktonic bacteria of a saline Lake located in Sovata, Romania.

Authors:  A K Borsodi; R I Kiss; G Cech; B Vajna; E M Tóth; K Márialigeti
Journal:  Folia Microbiol (Praha)       Date:  2010-10-13       Impact factor: 2.099

4.  Bacterial Diversity in Microbial Mats and Sediments from the Atacama Desert.

Authors:  Maria Cecilia Rasuk; Ana Beatriz Fernández; Daniel Kurth; Manuel Contreras; Fernando Novoa; Daniel Poiré; María Eugenia Farías
Journal:  Microb Ecol       Date:  2015-07-30       Impact factor: 4.552

5.  Extremophile culture collection from Andean lakes: extreme pristine environments that host a wide diversity of microorganisms with tolerance to UV radiation.

Authors:  Omar F Ordoñez; María R Flores; Julian R Dib; Agustin Paz; María E Farías
Journal:  Microb Ecol       Date:  2009-06-04       Impact factor: 4.552

6.  Seasonal fluctuations in ionic concentrations drive microbial succession in a hypersaline lake community.

Authors:  Sheila Podell; Joanne B Emerson; Claudia M Jones; Juan A Ugalde; Sue Welch; Karla B Heidelberg; Jillian F Banfield; Eric E Allen
Journal:  ISME J       Date:  2013-12-12       Impact factor: 10.302

7.  Culture-independent metagenomic approach to characterize the surface and subsurface soil bacterial community in the Brahmaputra valley, Assam, North-East India, an Indo-Burma mega-biodiversity hotspot.

Authors:  P N Bhattacharyya; B Tanti; P Barman; D K Jha
Journal:  World J Microbiol Biotechnol       Date:  2013-08-30       Impact factor: 3.312

8.  Contrasting taxonomic stratification of microbial communities in two hypersaline meromictic lakes.

Authors:  Adrian-Ştefan Andrei; Michael S Robeson; Andreea Baricz; Cristian Coman; Vasile Muntean; Artur Ionescu; Giuseppe Etiope; Mircea Alexe; Cosmin Ionel Sicora; Mircea Podar; Horia Leonard Banciu
Journal:  ISME J       Date:  2015-05-01       Impact factor: 10.302

9.  Abundance and diversity of prokaryotes in ephemeral hypersaline lake Chott El Jerid using Illumina Miseq sequencing, DGGE and qPCR assays.

Authors:  Manel Ben Abdallah; Fatma Karray; Najwa Kallel; Fabrice Armougom; Najla Mhiri; Marianne Quéméneur; Jean-Luc Cayol; Gaël Erauso; Sami Sayadi
Journal:  Extremophiles       Date:  2018-07-16       Impact factor: 2.395

10.  Metagenomic insights into strategies of carbon conservation and unusual sulfur biogeochemistry in a hypersaline Antarctic lake.

Authors:  Sheree Yau; Federico M Lauro; Timothy J Williams; Matthew Z Demaere; Mark V Brown; John Rich; John Ae Gibson; Ricardo Cavicchioli
Journal:  ISME J       Date:  2013-04-25       Impact factor: 10.302

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