Literature DB >> 18344016

Binding of nontarget microorganisms from food washes to anti-Salmonella and anti-E. coli O157 immunomagnetic beads: minimizing the errors of random sampling in extreme dilute systems.

Peter Irwin1, Thi Ly-Huong Nguyen, Chin-Yi Chen.   

Abstract

For most applications, 3-5 observations, or samplings (n), are utilized to estimate total aerobic plate count in an average population (μ) that is greater than about 50 cells, or colony forming units (CFU), per sampled volume. We have chosen to utilize a 6 × 6 drop plate method for bacterial colony selection because it offers the means to rapidly perform all requisite dilutions in a 96-well format and plate these dilutions on solid media using minimal materials. Besides traditional quantitative purposes, we also need to select colonies which are well-separated from each other for the purpose of bacterial identification. To achieve this goal using the drop plate format requires the utilization of very dilute solutions (μ < 10 CFUs per sampled drop). At such low CFU densities the sampling error becomes problematic. To address this issue we produced both observed and computer-generated colony count data and divided a large sample of individual counts randomly into N subsamples each with n = 2-24 observations (N × n = 360). From these data we calculated the average total mean-normalized (x⁻(tot), n = 360) deviation of the total standard deviation (s (tot)) from each jth subsample's estimate (s ( j )), which we call Δ. When either observed or computer-generated Δ values were analyzed as a function of x⁻(tot), a set of relationships (∞ ₋₂√ ⁻x(tot)) were generated which appeared to converge at an n of about 18 observations. This finding was verified analytically at even lower CFU concentrations (⁻x(tot) ≈ 1 − 10 CFUs per observation). Additional experiments using the drop plate format and n = 18 samplings were performed on food samples along with most probable number (MPN) analyses and it was found that the two enumeration methods did not differ significantly.

Entities:  

Mesh:

Year:  2008        PMID: 18344016     DOI: 10.1007/s00216-008-1961-8

Source DB:  PubMed          Journal:  Anal Bioanal Chem        ISSN: 1618-2642            Impact factor:   4.142


  4 in total

1.  Antimicrobial activity of spherical silver nanoparticles prepared using a biocompatible macromolecular capping agent: evidence for induction of a greatly prolonged bacterial lag phase.

Authors:  Peter Irwin; Justin Martin; Ly-Huong Nguyen; Yiping He; Andrew Gehring; Chin-Yi Chen
Journal:  J Nanobiotechnology       Date:  2010-12-21       Impact factor: 10.435

2.  Complete Genome Sequence of Campylobacter jejuni YH001 from Beef Liver, Which Contains a Novel Plasmid.

Authors:  Yiping He; Xianghe Yan; Sue Reed; Yanping Xie; Chin-Yi Chen; Peter Irwin
Journal:  Genome Announc       Date:  2015-02-05

3.  Whole genome sequencing and analysis of Campylobacter coli YH502 from retail chicken reveals a plasmid-borne type VI secretion system.

Authors:  Sandeep Ghatak; Yiping He; Sue Reed; Terence Strobaugh; Peter Irwin
Journal:  Genom Data       Date:  2017-02-06

4.  Complete Genome Sequence and Annotation of Campylobacter jejuni YH003, Isolated from Retail Chicken.

Authors:  Yiping He; Sue Reed; Terence P Strobaugh
Journal:  Microbiol Resour Announc       Date:  2020-01-23
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.