Literature DB >> 18330965

Where water is oxidized to dioxygen: structure of the photosynthetic Mn4Ca cluster from X-ray spectroscopy.

Junko Yano1, Vittal K Yachandra.   

Abstract

Light-driven oxidation of water to dioxygen in plants, algae, and cyanobacteria is catalyzed within photosystem II (PS II) by a Mn 4Ca cluster. Although the cluster has been studied by many different methods, its structure and mechanism have remained elusive. X-ray absorption and emission spectroscopy and extended X-ray absorption fine structure studies have been particularly useful in probing the electronic and geometric structures and the mechanism of the water oxidation reaction. Recent progress, reviewed here, includes polarized X-ray absorption spectroscopy measurements of PS II single crystals. Analysis of those results has constrained the Mn 4Ca cluster geometry to a set of three similar high-resolution structures. The structure of the cluster from the present study is unlike either the 3.0- or 3.5-A-resolution X-ray structures or other previously proposed models. The differences between the models derived from X-ray spectroscopy and crystallography are predominantly because of damage to the Mn 4Ca cluster by X-rays under conditions used for the structure determination by X-ray crystallography. X-ray spectroscopy studies are also used for studying the changes in the structure of the Mn 4Ca catalytic center as it cycles through the five intermediate states known as the S i states ( i = 0-4). The electronic structure of the Mn 4Ca cluster has been studied more recently using resonant inelastic X-ray scattering spectroscopy (RIXS), in addition to the earlier X-ray absorption and emission spectroscopy methods. These studies are revealing that the assignment of formal oxidation states is overly simplistic. A more accurate description should consider the charge density on the Mn atoms, which includes the covalency of the bonds and delocalization of the charge over the cluster. The geometric and electronic structures of the Mn 4Ca cluster in the S states derived from X-ray spectroscopy are leading to a detailed understanding of the mechanism of O-O bond formation during the photosynthetic water-splitting process.

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Year:  2008        PMID: 18330965      PMCID: PMC3947645          DOI: 10.1021/ic7016837

Source DB:  PubMed          Journal:  Inorg Chem        ISSN: 0020-1669            Impact factor:   5.165


  70 in total

1.  Dual-mode EPR study of new signals from the S3-state of oxygen-evolving complex in photosystem II.

Authors:  T Matsukawa; H Mino; D Yoneda; A Kawamori
Journal:  Biochemistry       Date:  1999-03-30       Impact factor: 3.162

2.  Calcium EXAFS establishes the Mn-Ca cluster in the oxygen-evolving complex of photosystem II.

Authors:  Roehl M Cinco; Karen L McFarlane Holman; John H Robblee; Junko Yano; Shelly A Pizarro; Emanuele Bellacchio; Kenneth Sauer; Vittal K Yachandra
Journal:  Biochemistry       Date:  2002-10-29       Impact factor: 3.162

3.  Crystal structure of oxygen-evolving photosystem II from Thermosynechococcus vulcanus at 3.7-A resolution.

Authors:  Nobuo Kamiya; Jian-Ren Shen
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-23       Impact factor: 11.205

Review 4.  Water-splitting chemistry of photosystem II.

Authors:  James P McEvoy; Gary W Brudvig
Journal:  Chem Rev       Date:  2006-11       Impact factor: 60.622

5.  X-ray absorption spectroscopy on layered photosystem II membrane particles suggests manganese-centered oxidation of the oxygen-evolving complex for the S0-S1, S1-S2, and S2-S3 transitions of the water oxidation cycle.

Authors:  L Iuzzolino; J Dittmer; W Dörner; W Meyer-Klaucke; H Dau
Journal:  Biochemistry       Date:  1998-12-08       Impact factor: 3.162

6.  Parallel polarization electron paramagnetic resonance studies of the S1-state manganese cluster in the photosynthetic oxygen-evolving system.

Authors:  T Yamauchi; H Mino; T Matsukawa; A Kawamori; T Ono
Journal:  Biochemistry       Date:  1997-06-17       Impact factor: 3.162

7.  Absence of Mn-centered oxidation in the S(2) --> S(3) transition: implications for the mechanism of photosynthetic water oxidation.

Authors:  J Messinger; J H Robblee; U Bergmann; C Fernandez; P Glatzel; H Visser; R M Cinco; K L McFarlane; E Bellacchio; S A Pizarro; S P Cramer; K Sauer; M P Klein; V K Yachandra
Journal:  J Am Chem Soc       Date:  2001-08-15       Impact factor: 15.419

Review 8.  Mechanism of photosynthetic water oxidation: combining biophysical studies of photosystem II with inorganic model chemistry.

Authors:  J S Vrettos; J Limburg; G W Brudvig
Journal:  Biochim Biophys Acta       Date:  2001-01-05

9.  EPR study of the oxygen evolving complex in His-tagged photosystem II from the cyanobacterium Synechococcus elongatus.

Authors:  A Boussac; M Sugiura; Y Inoue; A W Rutherford
Journal:  Biochemistry       Date:  2000-11-14       Impact factor: 3.162

10.  Evidence for the proximity of calcium to the manganese cluster of photosystem II: determination by X-ray absorption spectroscopy.

Authors:  M J Latimer; V J DeRose; I Mukerji; V K Yachandra; K Sauer; M P Klein
Journal:  Biochemistry       Date:  1995-08-29       Impact factor: 3.162

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  28 in total

1.  Room temperature femtosecond X-ray diffraction of photosystem II microcrystals.

Authors:  Jan Kern; Roberto Alonso-Mori; Julia Hellmich; Rosalie Tran; Johan Hattne; Hartawan Laksmono; Carina Glöckner; Nathaniel Echols; Raymond G Sierra; Jonas Sellberg; Benedikt Lassalle-Kaiser; Richard J Gildea; Pieter Glatzel; Ralf W Grosse-Kunstleve; Matthew J Latimer; Trevor A McQueen; Dörte DiFiore; Alan R Fry; Marc Messerschmidt; Alan Miahnahri; Donald W Schafer; M Marvin Seibert; Dimosthenis Sokaras; Tsu-Chien Weng; Petrus H Zwart; William E White; Paul D Adams; Michael J Bogan; Sébastien Boutet; Garth J Williams; Johannes Messinger; Nicholas K Sauter; Athina Zouni; Uwe Bergmann; Junko Yano; Vittal K Yachandra
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-04       Impact factor: 11.205

2.  Synthetic model of the asymmetric [Mn3CaO4] cubane core of the oxygen-evolving complex of photosystem II.

Authors:  Shreya Mukherjee; Jamie A Stull; Junko Yano; Theocharis C Stamatatos; Konstantina Pringouri; Troy A Stich; Khalil A Abboud; R David Britt; Vittal K Yachandra; George Christou
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-30       Impact factor: 11.205

3.  Two-electron reactions S2QB -->S0QB and S3QB -->S1QB are involved in deactivation of higher S states of the oxygen-evolving complex of Photosystem II.

Authors:  Taras K Antal; Päivi Sarvikas; Esa Tyystjärvi
Journal:  Biophys J       Date:  2009-06-03       Impact factor: 4.033

4.  A possible evolutionary origin for the Mn4 cluster in photosystem II: from manganese superoxide dismutase to oxygen evolving complex.

Authors:  M Mahdi Najafpour
Journal:  Orig Life Evol Biosph       Date:  2009-01-16       Impact factor: 1.950

5.  Structural changes of the oxygen-evolving complex in photosystem II during the catalytic cycle.

Authors:  Carina Glöckner; Jan Kern; Matthias Broser; Athina Zouni; Vittal Yachandra; Junko Yano
Journal:  J Biol Chem       Date:  2013-06-13       Impact factor: 5.157

6.  Entangled quantum electronic wavefunctions of the Mn₄CaO₅ cluster in photosystem II.

Authors:  Yuki Kurashige; Garnet Kin-Lic Chan; Takeshi Yanai
Journal:  Nat Chem       Date:  2013-06-09       Impact factor: 24.427

7.  Activation of a water molecule using a mononuclear Mn complex: from Mn-aquo, to Mn-hydroxo, to Mn-oxyl via charge compensation.

Authors:  Benedikt Lassalle-Kaiser; Christelle Hureau; Dimitrios A Pantazis; Yulia Pushkar; Régis Guillot; Vittal K Yachandra; Junko Yano; Frank Neese; Elodie Anxolabéhère-Mallart
Journal:  Energy Environ Sci       Date:  2010-07-01       Impact factor: 38.532

8.  Direct detection of oxygen ligation to the Mn(4)Ca cluster of photosystem II by X-ray emission spectroscopy.

Authors:  Yulia Pushkar; Xi Long; Pieter Glatzel; Gary W Brudvig; G Charles Dismukes; Terrence J Collins; Vittal K Yachandra; Junko Yano; Uwe Bergmann
Journal:  Angew Chem Int Ed Engl       Date:  2010       Impact factor: 15.336

9.  L-Edge X-ray Absorption Spectroscopy of Dilute Systems Relevant to Metalloproteins Using an X-ray Free-Electron Laser.

Authors:  Rolf Mitzner; Jens Rehanek; Jan Kern; Sheraz Gul; Johan Hattne; Taketo Taguchi; Roberto Alonso-Mori; Rosalie Tran; Christian Weniger; Henning Schröder; Wilson Quevedo; Hartawan Laksmono; Raymond G Sierra; Guangye Han; Benedikt Lassalle-Kaiser; Sergey Koroidov; Katharina Kubicek; Simon Schreck; Kristjan Kunnus; Maria Brzhezinskaya; Alexander Firsov; Michael P Minitti; Joshua J Turner; Stefan Moeller; Nicholas K Sauter; Michael J Bogan; Dennis Nordlund; William F Schlotter; Johannes Messinger; Andrew Borovik; Simone Techert; Frank M F de Groot; Alexander Föhlisch; Alexei Erko; Uwe Bergmann; Vittal K Yachandra; Philippe Wernet; Junko Yano
Journal:  J Phys Chem Lett       Date:  2013-10-09       Impact factor: 6.475

10.  Cyanobacterial photosystem II at 2.9-A resolution and the role of quinones, lipids, channels and chloride.

Authors:  Albert Guskov; Jan Kern; Azat Gabdulkhakov; Matthias Broser; Athina Zouni; Wolfram Saenger
Journal:  Nat Struct Mol Biol       Date:  2009-02-15       Impact factor: 15.369

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