Literature DB >> 18329321

Plant systems biology comes of age.

Joshua S Yuan1, David W Galbraith, Susie Y Dai, Patrick Griffin, C Neal Stewart.   

Abstract

'Omics' research approaches have produced copious data for living systems, which have necessitated the development of systems biology to integrate multidimensional biological information into networks and models. Applications of systems biology to plant science have been rapid, and have increased our knowledge about circadian rhythms, multigenic traits, stress responses and plant defenses, and have advanced the virtual plant project.

Mesh：

Year:  2008        PMID： 18329321     DOI： 10.1016/j.tplants.2008.02.003

Source DB:  PubMed          Journal:  Trends Plant Sci        ISSN： 1360-1385            Impact factor:   18.313


  43 in total

1.  Application of an improved proteomics method for abundant protein cleanup: molecular and genomic mechanisms study in plant defense.

Authors:  Yixiang Zhang; Peng Gao; Zhuo Xing; Shumei Jin; Zhide Chen; Lantao Liu; Nasie Constantino; Xinwang Wang; Weibing Shi; Joshua S Yuan; Susie Y Dai
Journal:  Mol Cell Proteomics       Date:  2013-08-13       Impact factor: 5.911

Review 2.  Plant metabolic modeling: achieving new insight into metabolism and metabolic engineering.

Authors:  Kambiz Baghalian; Mohammad-Reza Hajirezaei; Falk Schreiber
Journal:  Plant Cell       Date:  2014-10-24       Impact factor: 11.277

3.  Precision medicine and molecular imaging: new targeted approaches toward cancer therapeutic and diagnosis.

Authors:  Mojtaba Ghasemi; Iraj Nabipour; Abdolmajid Omrani; Zeinab Alipour; Majid Assadi
Journal:  Am J Nucl Med Mol Imaging       Date:  2016-11-30

Review 4.  Towards systems biological understanding of leaf senescence.

Authors:  Yongfeng Guo
Journal:  Plant Mol Biol       Date:  2012-10-13       Impact factor: 4.076

Review 5.  Plant systems biology: insights, advances and challenges.

Authors:  Bhavisha P Sheth; Vrinda S Thaker
Journal:  Planta       Date:  2014-03-27       Impact factor: 4.116

6.  Mathematical modeling of the central carbohydrate metabolism in Arabidopsis reveals a substantial regulatory influence of vacuolar invertase on whole plant carbon metabolism.

Authors:  Thomas Nägele; Sebastian Henkel; Imke Hörmiller; Thomas Sauter; Oliver Sawodny; Michael Ederer; Arnd G Heyer
Journal:  Plant Physiol       Date:  2010-03-05       Impact factor: 8.340

7.  Transcriptome-wide analysis of uncapped mRNAs in Arabidopsis reveals regulation of mRNA degradation.

Authors:  Yuling Jiao; José Luis Riechmann; Elliot M Meyerowitz
Journal:  Plant Cell       Date:  2008-10-24       Impact factor: 11.277

8.  Correlation Network Analysis reveals a sequential reorganization of metabolic and transcriptional states during germination and gene-metabolite relationships in developing seedlings of Arabidopsis.

Authors:  Elizabeth Allen; Annick Moing; Timothy Md Ebbels; Mickaël Maucourt; A Deri Tomos; Dominique Rolin; Mark A Hooks
Journal:  BMC Syst Biol       Date:  2010-05-13

9.  Plant protein-protein interaction network and interactome.

Authors:  Yixiang Zhang; Peng Gao; Joshua S Yuan
Journal:  Curr Genomics       Date:  2010-03       Impact factor: 2.236

10.  Transcriptome responses to combinations of stresses in Arabidopsis.

Authors:  Simon Rasmussen; Pankaj Barah; Maria Cristina Suarez-Rodriguez; Simon Bressendorff; Pia Friis; Paolo Costantino; Atle M Bones; Henrik Bjørn Nielsen; John Mundy
Journal:  Plant Physiol       Date:  2013-02-27       Impact factor: 8.340
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