| Literature DB >> 18325094 |
Giles H Cunnick1, Wen G Jiang, Tony Douglas-Jones, Gareth Watkins, Kelvin F Gomez, Mike J Morgan, Ashok Subramanian, Kefah Mokbel, Robert E Mansel.
Abstract
INTRODUCTION: There have been few studies on lymphangiogenesis in the past due to the lack of specific lymphatic endothelial markers, and lymphatic-specific growth factors. Recently, these limitations have been relieved by the discovery of a small number of potential lymphatic-specific markers. The relationship between lymphangiogenesis and regional or distant metastasis has not previously been investigated in humans. Using these lymphatic markers, it is possible to explore the relationship between lymphangiogenesis and tumour metastasis. This study indirectly quantified lymphangiogenesis by measuring mRNA expression of all seven lymphatic markers described above in breast cancers and correlated these markers with lymphatic involvement and survival. The cDNA from 153 frozen archived breast samples were analysed with Q-PCR for all seven lymphangiogenic markers. This was correlated with various prognostic factors as well as patient survival.Entities:
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Year: 2008 PMID: 18325094 PMCID: PMC2278160 DOI: 10.1186/1476-4598-7-23
Source DB: PubMed Journal: Mol Cancer ISSN: 1476-4598 Impact factor: 27.401
Primers used for PCR analysis
| Molecule | PCR Primer |
| LYVE:1 | 5'-gtgcttcagcctggtgttg-3' |
| Prox-1 | 5'-atgtcatctcaccacctgag-3' |
| Podoplanin | 5'-tggtggaatcatcgttgtggttatgc-3' |
| 5'-Nucleotidase | 5'-tggagtgatcggttacagaatgc-3' |
| VEGF-C | 5'-ggcttctcctggtgacatctg-3' |
| VEGF-D | 5'-ctaatgtcaactgcttag-3' |
| VEGFR-3 | 5'-gcgactgtggctctg-3' |
| VEGFR-2 | 5'-gcctctgtgggtttgcctagtgtttc-3' |
| β-actin | 5'-atgatatcgccgcgctcgt-3' |
Please note for all tables, the number in parentheses gives the number of samples valid for analysis following PCR.
Primers used for Q-PCR analysis
| Molecule | Q-PCR Primer |
| LYVE-1 | 5'-FAM-CCGCGGGATGGAAAGCTCTTCTGCCGCGG-MR-HEG-GGTCCAAGGCTCTTTGCGT-3' |
| VEGFR-3 | 5'-ACGGCCTGGTGAGTGGC-3'(Forward) |
| VEGFR-2 | 5'-TGTGGCTCTGCGTGGAGA-3' (Forward) |
| Prox-1 | 5'-GCAGGAAAAGTTCTACCA-3' (Forward) |
| Podoplanin | 5'-GAATCATCGTTGTGGTTATG-3' (Forward) |
| 5'nucleotidase | 5'-tcgacctcctggagtgatcgg-3' (Forward) |
| VEGF-C | Z: 5'-GCTTCTCCTGGTGACATC-3' (Forward) |
| VEGF-D | 5'-GCTCCAGTAATGAACATGG-3' (Forward) |
Please note for all tables, the number in parentheses gives the number of samples valid for analysis following PCR.
Levels of mRNA transcript in tumour vs normal tissue
| 57.0 ± 326.3 01 (93) | 0.28 ± 0.37 (23) | < 0.0001 | |
| 5099.1 ± 8353.1 (119) | 1270.2 ± 1555.4 (32) | 0.0009 | |
| 13722 ± 67277 (120) | 4973 ± 7115 (29) | 0.0483 | |
| 4964.4 ± 7166.3 (112) | 3208.1 ± 8760.9 (32) | 0.0068 | |
| 121.76 ± 223.84 (120) | 65.64 ± 197.00 (32) | 0.0104 | |
| 1899.2 ± 8596.4 (84) | 270.4 ± 305.5 (23) | 0.0255 | |
| 57.3 ± 113.1 (58) | 11.7 ± 12.2 (15) | 0.0163 | |
| 5.87 ± 16.17 (116) | 4.01 ± 12.39 (31) | 0.9017 | |
| 137.4 ± 60.1 | 160 ± 111 | 0.3694 |
Please note for all tables, the number in parentheses gives the number of samples valid for analysis following PCR.
Level of mRNA transcript in node +ve vs node -ve tumours
| 128.0 ± 231.9 (36) | 12.1 ± 18.2 (57) | 0.89 | |
| 6140.0 ± 10922.0 10571 | 4466.0 ± 6309.0 (74) | 0.82 | |
| 23306.0 ± 105711.0 (46) | 7764.0 ± 19895.0 (74) | 0.125 | |
| 5170.4 ± 6676.5 (42) | 4840.8 ± 7489.2 (70) | 0.550 | |
| 129.4 ± 238.3 (46) | 117.0 ± 215.9 (74) | 0.480 | |
| 3989.0 ± 13759.0(32) | 613.1 ± 877.4 (52) | 0.622 | |
| 114.5 ± 186.7 1 | 31.5 ± 36.1 (40) | 0.286 | |
| 4.2 ± 14.8 (43) | 6.8 ± 17.0 (73) | 0.570 | |
| 317.0 ± 167.0 | 45.0 ± 19.0 | 0.0369 |
Please note for all tables, the number in parentheses gives the number of samples valid for analysis following PCR.
Levels of mRNA transcript vs tumour grade
| 12.3 ± 30.2 (20) | 67.0 ± 328.4 (33) | 70.9 ± 401.2 (40) | |
| 7083 ± 9542 (24) | 2727 ± 4693 (41) | 5536 ± 9999 (55) | |
| 3099 ± 3579 (24) | 12774 ± 26291 (41) | 18775 ± 95973 (56) | |
| 5187 ± 7647 (22) | 4652 ± 7725 (38) | 5615 ± 10888 (52) | |
| 110 ± 161 (24) | 122 ± 206 (41) | 127 ± 259 (56) | |
| 702 ± 270 (15) | 1664 ± 942 (29) | 2290 ± 1768 (42) | |
| 44.3 ± 17.1 (14) | 26.2 ± 6.23 (17) | 62.6 ± 26.3 (29) | |
| 15.9 ± 30.5 (24) | 5.1 ± 11.2 (39) | 1.8 ± 3.4 (54) | |
| 160 ± 130 | 236 ± 176 | 65.9 ± 26.5 |
Please note for all tables, the number in parentheses gives the number of samples valid for analysis following PCR.
Levels of mRNA transcript vs tumour type
| LYVE-1 | 42.4 ± 295.4 (74) | 241.1 ± 666.3 (8) | n/s |
| PROX-1 | 5743.0 ± 9206.0 (97) | 2928.0 ± 4117 (10) | n/s |
| PODOPLANIN | 15498.0 ± 74049.0 (98) | 1783.0 ± 2657.0 (10) | n/s |
| 5'-nucleotidase | 4813.0 ± 6873.0 (91) | 1522 ± 2371 (10) | n/s |
| VEGFR-3 | 126.3 ± 239.4 (98) | 99.0 ± 149.3 (10) | n/s |
| VEGF-C | 2098 ± 1093 (72) | 524 ± 334 (3) | n/s |
| VEGF-D | 47.3 ± 15.8 (49) | 78.6 ± 45.1 (5) | n/s |
| VEGFR-2 | 4.2 ± 14.7 (94) | 10.1 ± 14.5 (10) | n/s |
| VEGF-C/VEEGF-D ratio | 119.0 ± 65.5 | 293.0 ± 258.0 | n/s |
Please note for all tables, the number in parentheses gives the number of samples valid for analysis following PCR.
Levels of mRNA transcript vs prognosis
| 13.8 ± 34.3 (35) | 3.4 ± 6.6 (37) | 272.9 ± 140.9 (17) | |
| 4785.0 ± 7723.0 (44) | 4354.0 ± 4530.0 (49) | 7638.0 ± 14562.0 (22) | |
| 4341.0 ± 4919 (44) | 10353.0 ± 22574 (49) | 37811.0 ± 149439 (23) | |
| 4708.0 ± 8053 (40) | 44217.0 ± 4337 (45) | 6471.0 ± 15237.0 (22) | |
| 117.0 ± 171.0 (44) | 122.0 ± 252 (49) | 133.0 ± 268.0 (23) | |
| 467.0 ± 665.0 (45) | 911.0 ± 1187.0 389.0( | 3989.0 ± 13759.0 (32) | |
| 29.3 ± 28.8 (36) | 117.3 ± 198.9 (15) | 83.7 ± 106.6 (6) | |
| 12.2 ± 25.0 (43) | 2.1 ± 4.0 (48) | 2.4 ± 4.3 (21) | |
| 45.0 ± 19.0 | 412.0 ± 77.0 (73) | 77.0 ± 73.0 |
Please note for all tables, the number in parentheses gives the number of samples valid for analysis following PCR.
Levels of mRNA transcription vs outcome
| 79.1 ± 389.0 (65) | 6.1 ± 11.0 (23) | 0.932 | |
| 4568.0 ± 6729.0 (84) | 7420.0 ± 12336 (31) | 0.076 | |
| 13605.0 ± 78024 6550 | 9336.0 ± 15008.0 (31) | 0.186 | |
| 4230.0 ± 6550.0 (78) | 8091.0 ± 14398.0 (29) | 0.203 | |
| 113.0 ± 229.0 (85) | 149.0 ± 227.0 (31) | 0.064 | |
| 1124.0 ± 464.0 (60) | 3919.0 ± 3370.0 (22) | 0.660 | |
| 47.9 ± 17.1(44) | 60.3 ± 24.5 (12) | 0.881 | |
| 5.5 ± 15.2 (83) | 4.1 ± 99.0 (29) | 0.375 | |
| 148.0 ± 78.0 | 108.0 ± 106.0 | 0.77 |
Please note for all tables, the number in parentheses gives the number of samples valid for analysis following PCR.
Levels of mRNA transcripts ve Oestrogen receptor (ER) status
| ER(-) | ER(+) | P value | |
| LYVE1 | 53.6 ± 10.1 | 66.7 ± 17.9 | 0.53 |
| PROX1 | 6394 ± 880 | 2860 ± 2429 | 0.57 |
| Podoplanin | 16923 ± 11842 | 5664 ± 1255 | 0.24 |
| 5-Nucleotidase | 4358 ± 716 | 7544 ± 2458 | 0.22 |
| VEGF-R3 | 111 ± 27 | 144 ± 39 | 0.47 |
| VEGF-C | 1189 ± 507 | 3748 ± 3222 | 0.44 |
| VEGF-D | 50 ± 19 | 33.5 ± 18 | 0.53 |
| VEGF-R2 | 5.2 ± 1.9 | 6.0 ± 1.8 | 0.76 |
| VEGF-C/VEGF-D ratio | 128.6 ± 81.8 | 93.524136.6 | 0.70 |
Please note for all tables, the number in parentheses gives the number of samples valid for analysis following PCR.