Literature DB >> 18323616

Crystallization and preliminary X-ray crystallographic analysis of rabbit L-gulonate 3-dehydrogenase.

Yukuhiko Asada1, Chizu Kuroishi, Yoko Ukita, Rie Sumii, Satoshi Endo, Toshiyuki Matsunaga, Akira Hara, Naoki Kunishima.   

Abstract

Rabbit L-gulonate 3-dehydrogenase was crystallized using the oil-microbatch method at 295 K. X-ray diffraction data were collected to 1.70 A resolution from a crystal at 100 K using synchrotron radiation. The crystal belongs to the C-centred monoclinic space group C2, with unit-cell parameters a = 71.81, b = 69.08, c = 65.64 A, beta = 102.7 degrees. Assuming the presence of a monomeric protomer in the asymmetric unit gives a V(M) value of 2.21 A(3) Da(-1) and a solvent content of 44.4%. A cocrystal with NADH, which was isomorphous to the apo form, was also prepared and diffraction data were collected to 1.85 A resolution using Cu Kalpha radiation at 100 K.

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Year:  2008        PMID: 18323616      PMCID: PMC2374150          DOI: 10.1107/S1744309108004326

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  14 in total

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Authors:  M D Winn; A W Ashton; P J Briggs; C C Ballard; P Patel
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Journal:  J Struct Funct Genomics       Date:  2006-04-28

Review 3.  Beta oxidation of fatty acids.

Authors:  H Schulz
Journal:  Biochim Biophys Acta       Date:  1991-01-28

4.  Crystallography & NMR system: A new software suite for macromolecular structure determination.

Authors:  A T Brünger; P D Adams; G M Clore; W L DeLano; P Gros; R W Grosse-Kunstleve; J S Jiang; J Kuszewski; M Nilges; N S Pannu; R J Read; L M Rice; T Simonson; G L Warren
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1998-09-01

5.  Two mitochondrial 3-hydroxyacyl-CoA dehydrogenases in bovine liver.

Authors:  A Kobayashi; L L Jiang; T Hashimoto
Journal:  J Biochem       Date:  1996-04       Impact factor: 3.387

6.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

7.  Structural and functional characterization of rabbit and human L-gulonate 3-dehydrogenase.

Authors:  Syuhei Ishikura; Noriyuki Usami; Mayuko Araki; Akira Hara
Journal:  J Biochem       Date:  2005-03       Impact factor: 3.387

8.  Glutamate 170 of human l-3-hydroxyacyl-CoA dehydrogenase is required for proper orientation of the catalytic histidine and structural integrity of the enzyme.

Authors:  J J Barycki; L K O'Brien; A W Strauss; L J Banaszak
Journal:  J Biol Chem       Date:  2001-07-12       Impact factor: 5.157

9.  Biochemical characterization and crystal structure determination of human heart short chain L-3-hydroxyacyl-CoA dehydrogenase provide insights into catalytic mechanism.

Authors:  J J Barycki; L K O'Brien; J M Bratt; R Zhang; R Sanishvili; A W Strauss; L J Banaszak
Journal:  Biochemistry       Date:  1999-05-04       Impact factor: 3.162

10.  Human CRYL1, a novel enzyme-crystallin overexpressed in liver and kidney and downregulated in 58% of liver cancer tissues from 60 Chinese patients, and four new homologs from other mammalians.

Authors:  Jian Chen; Long Yu; Dan Li; Qin Gao; Jishi Wang; Xinghua Huang; Gang Bi; Hai Wu; Shouyuan Zhao
Journal:  Gene       Date:  2003-01-02       Impact factor: 3.688

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