Literature DB >> 18323611

Crystallization and preliminary X-ray study of native and selenomethionyl beta-1,4-mannanase AaManA from Alicyclobacillus acidocaldariusTc-12-31.

Yueling Zhang1, Feng Gao, Yanfen Xue, Yan Zeng, Hao Peng, Jianxun Qi, Yanhe Ma.   

Abstract

AaManA, a beta-1,4-mannanase from the thermoacidophile Alicyclobacillus acidocaldarius Tc-12-31, was expressed in Escherichia coli and purified in a form suitable for X-ray crystallographic analysis. Crystals were obtained using the hanging-drop vapour-diffusion method at 291 K using ammonium dihydrogen phosphate as a precipitant. Data were collected from native mannanase and from a selenomethionyl derivative to 1.90 and 1.99 A, respectively, at 100 K. The native crystal belongs to the orthorhombic space group P2(1)2(1)2(1), with unit-cell parameters a = 44.34, b = 75.55, c = 88.02 A. The derivative crystal belonged to the same space group as native AaManA, with unit-cell parameters a = 44.55, b = 75.70, c = 92.66 A.

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Year:  2008        PMID: 18323611      PMCID: PMC2374155          DOI: 10.1107/S1744309108002832

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  21 in total

1.  Enhanced genome annotation using structural profiles in the program 3D-PSSM.

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Authors:  D Hogg; E J Woo; D N Bolam; V A McKie; H J Gilbert; R W Pickersgill
Journal:  J Biol Chem       Date:  2001-05-29       Impact factor: 5.157

3.  A classification of glycosyl hydrolases based on amino acid sequence similarities.

Authors:  B Henrissat
Journal:  Biochem J       Date:  1991-12-01       Impact factor: 3.857

4.  Solvent content of protein crystals.

Authors:  B W Matthews
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5.  Conserved catalytic machinery and the prediction of a common fold for several families of glycosyl hydrolases.

Authors:  B Henrissat; I Callebaut; S Fabrega; P Lehn; J P Mornon; G Davies
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Review 6.  Hemicellulases: their occurrence, purification, properties, and mode of action.

Authors:  R F Dekker; G N Richards
Journal:  Adv Carbohydr Chem Biochem       Date:  1976       Impact factor: 12.200

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Authors:  G D Van Duyne; R F Standaert; P A Karplus; S L Schreiber; J Clardy
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  3 in total

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Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-09-30

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Authors:  Brady D Lee; William A Apel; Peter P Sheridan; Linda C DeVeaux
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  3 in total

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