Literature DB >> 18322070

Inability of real-time reverse transcriptase PCR assay to detect subtype H7 avian influenza viruses isolated from wild birds.

Zheng Xing1, Carol Cardona, Phuong Dao, Beate Crossley, Sharon Hietala, Walter Boyce.   

Abstract

We report a failure of the real-time reverse transcriptase PCR H7 subtyping protocol currently used in national avian influenza surveillance programs. Significant substitutions in primer and probe target sequences were identified, especially in wild bird viruses. The protocol, originally designed for detecting H7 influenza viruses in poultry, is not reliable for wild bird surveillance.

Mesh:

Substances:

Year:  2008        PMID: 18322070      PMCID: PMC2395069          DOI: 10.1128/JCM.02426-07

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  13 in total

1.  Further studies on the activation of influenza virus by proteolytic cleavage of the haemagglutinin.

Authors:  H D Klenk; R Rott; M Orlich
Journal:  J Gen Virol       Date:  1977-07       Impact factor: 3.891

2.  Migratory birds and avian flu.

Authors:  Rob Fergus; Michael Fry; William B Karesh; Peter P Marra; Scott Newman; Ellen Paul
Journal:  Science       Date:  2006-05-12       Impact factor: 47.728

3.  Highly pathogenic H5N1 influenza virus infection in migratory birds.

Authors:  J Liu; H Xiao; F Lei; Q Zhu; K Qin; X-W Zhang; X-L Zhang; D Zhao; G Wang; Y Feng; J Ma; W Liu; J Wang; G F Gao
Journal:  Science       Date:  2005-07-06       Impact factor: 47.728

4.  Universal primer set for the full-length amplification of all influenza A viruses.

Authors:  E Hoffmann; J Stech; Y Guan; R G Webster; D R Perez
Journal:  Arch Virol       Date:  2001-12       Impact factor: 2.574

Review 5.  Host range of avian influenza virus in free-living birds.

Authors:  D E Stallknecht; S M Shane
Journal:  Vet Res Commun       Date:  1988       Impact factor: 2.459

6.  Development of real-time RT-PCR for the detection of avian influenza virus.

Authors:  E Spackman; D A Senne; L L Bulaga; T J Myers; M L Perdue; L P Garber; K Lohman; L T Daum; D L Suarez
Journal:  Avian Dis       Date:  2003       Impact factor: 1.577

7.  Epizootiology of avian influenza: effect of season on incidence in sentinel ducks and domestic turkeys in Minnesota.

Authors:  D A Halvorson; C J Kelleher; D A Senne
Journal:  Appl Environ Microbiol       Date:  1985-04       Impact factor: 4.792

8.  Epizootiology of avian influenza--simultaneous monitoring of sentinel ducks and turkeys in Minnesota.

Authors:  D Halvorson; D Karunakaran; D Senne; C Kelleher; C Bailey; A Abraham; V Hinshaw; J Newman
Journal:  Avian Dis       Date:  1983 Jan-Mar       Impact factor: 1.577

9.  Proteolytic cleavage of influenza virus hemagglutinins: primary structure of the connecting peptide between HA1 and HA2 determines proteolytic cleavability and pathogenicity of Avian influenza viruses.

Authors:  F X Bosch; W Garten; H D Klenk; R Rott
Journal:  Virology       Date:  1981-09       Impact factor: 3.616

10.  Mallards and highly pathogenic avian influenza ancestral viruses, northern Europe.

Authors:  Vincent J Munster; Anders Wallensten; Chantal Baas; Guus F Rimmelzwaan; Martin Schutten; Björn Olsen; Albert D M E Osterhaus; Ron A M Fouchier
Journal:  Emerg Infect Dis       Date:  2005-10       Impact factor: 6.883

View more
  6 in total

1.  Adaptive evolution of diagnostic resistance.

Authors:  David Metzgar
Journal:  J Clin Microbiol       Date:  2011-05-04       Impact factor: 5.948

2.  Lyssavirus detection and typing using pyrosequencing.

Authors:  Paola De Benedictis; Cristian De Battisti; Laurent Dacheux; Sabrina Marciano; Silvia Ormelli; Angela Salomoni; Silvia Tiozzo Caenazzo; Anthony Lepelletier; Hervé Bourhy; Ilaria Capua; Giovanni Cattoli
Journal:  J Clin Microbiol       Date:  2011-03-09       Impact factor: 5.948

3.  The prevention and control of avian influenza: the avian influenza coordinated agriculture project.

Authors:  C Cardona; R Slemons; D Perez
Journal:  Poult Sci       Date:  2009-04       Impact factor: 3.352

4.  Development of a multi-target TaqMan assay to detect eastern equine encephalitis virus variants in mosquitoes.

Authors:  Philip M Armstrong; Nicholanna Prince; Theodore G Andreadis
Journal:  Vector Borne Zoonotic Dis       Date:  2012-07-26       Impact factor: 2.133

5.  Detection of NP, N3 and N7 antibodies to avian influenza virus by indirect ELISA using yeast-expressed antigens.

Authors:  Chitra Upadhyay; Arun Ammayappan; Vikram N Vakharia
Journal:  Virol J       Date:  2009-10-07       Impact factor: 4.099

6.  Highly pathogenic avian influenza virus A (H7N3) in domestic poultry, Saskatchewan, Canada, 2007.

Authors:  Yohannes Berhane; Tamiko Hisanaga; Helen Kehler; James Neufeld; Lisa Manning; Connie Argue; Katherine Handel; Kathleen Hooper-McGrevy; Marilyn Jonas; John Robinson; Robert G Webster; John Pasick
Journal:  Emerg Infect Dis       Date:  2009-09       Impact factor: 6.883

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.