Literature DB >> 18319451

Sanguibacter soli sp. nov., isolated from soil of a ginseng field.

Myung Kyum Kim1, Rama Krishna Pulla, Se-Young Kim, Tae-Hoo Yi, Nak-Kyun Soung, Deok-Chun Yang.   

Abstract

A Gram-positive, non-spore-forming, rod-shaped, motile bacterium, designated strain DCY22(T), was isolated from soil of a ginseng field in South Korea and characterized in order to determine its taxonomic position. 16S rRNA gene sequence analysis revealed that strain DCY22(T) belonged within the family Sanguibacteraceae, and highest levels of sequence similarity were found with Sanguibacter marinus 1-19(T) (96.8 %), Sanguibacter suarezii ST-26(T) (96.0 %), Sanguibacter inulinus ST-50(T) (95.9 %), Sanguibacter keddieii ST-74(T) (95.5 %), Terrabacter terrae PPLB(T) (94.0 %) and Terrabacter tumescens DSM 20308(T) (93.8 %). Chemotaxonomic investigations revealed that strain DCY22(T) possessed menaquinone MK-9, a common feature of members of the genus Sanguibacter. Predominant fatty acids were unknown ECL 13.961 (45.81 %), 17 : 0 anteiso (23.46 %), 18 : 0 iso (15.42 %) and unknown ECL 14.966 (8.70 %). The results of physiological and biochemical tests clearly demonstrated that strain DCY22(T) represents a novel species of the genus Sanguibacter, for which the name Sanguibacter soli sp. nov. is proposed. The type strain is DCY22(T) (=KCTC 13155(T)=JCM 14841(T)).

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Year:  2008        PMID: 18319451     DOI: 10.1099/ijs.0.65399-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  4 in total

1.  Genome-Based Taxonomic Classification of the Phylum Actinobacteria.

Authors:  Imen Nouioui; Lorena Carro; Marina García-López; Jan P Meier-Kolthoff; Tanja Woyke; Nikos C Kyrpides; Rüdiger Pukall; Hans-Peter Klenk; Michael Goodfellow; Markus Göker
Journal:  Front Microbiol       Date:  2018-08-22       Impact factor: 5.640

2.  Identification and characterization of class I chitinase in Panax ginseng C. A. Meyer.

Authors:  Rama Krishna Pulla; Ok Ran Lee; Jun-Gyo In; Shohana Parvin; Yu-Jin Kim; Ju-Sun Shim; Hua Sun; Yeon-Ju Kim; Kalaiselvi Senthil; Deok-Chun Yang
Journal:  Mol Biol Rep       Date:  2010-03-20       Impact factor: 2.316

3.  Complete genome sequence of Sanguibacter keddieii type strain (ST-74).

Authors:  Natalia Ivanova; Johannes Sikorski; David Sims; Thomas Brettin; John C Detter; Cliff Han; Alla Lapidus; Alex Copeland; Tijana Glavina Del Rio; Matt Nolan; Feng Chen; Susan Lucas; Hope Tice; Jan-Fang Cheng; David Bruce; Lynne Goodwin; Sam Pitluck; Amrita Pati; Konstantinos Mavromatis; Amy Chen; Krishna Palaniappan; Patrik D'haeseleer; Patrick Chain; Jim Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Markus Göker; Rüdiger Pukall; Hans-Peter Klenk; Nikos C Kyrpides
Journal:  Stand Genomic Sci       Date:  2009-09-24

4.  Genome sequencing and description of Oerskovia enterophila VJag, an agar- and cellulose-degrading bacterium.

Authors:  Vanessa Jag; Anja Poehlein; Frank R Bengelsdorf; Rolf Daniel; Peter Dürre
Journal:  Stand Genomic Sci       Date:  2017-05-04
  4 in total

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