Literature DB >> 18318113

[Non-standard genetic codes and translation termination].

S A Lekomtsev.   

Abstract

Genetic code is not universal. Various non-standard versions of the code were found in mitochondrial, prokaryotic and eukaryotic genomes. Stop codons are used to signal the ribosome stop translation of the coding sequence and prone to reassignment to sense codons. Class-1 termination factors recognize stop codons and promote hydrolysis of the peptidyl-tRNA in ribosome (RF1, RF2 in prokaryotes and eRF1 in eukaryotes). The class-1 factor termination specificity is changed in non-standart codes organisms. Pyrrolysine and selenocysteine use dissimilar decoding strategies. The various non-standart code origin hypotheses are described. It was proposed that specificity alteration of the class-1 release factor was a starting point for stop codon reassignment.

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Year:  2007        PMID: 18318113

Source DB:  PubMed          Journal:  Mol Biol (Mosk)        ISSN: 0026-8984


  2 in total

1.  Bioinformatic, structural, and functional analyses support release factor-like MTRF1 as a protein able to decode nonstandard stop codons beginning with adenine in vertebrate mitochondria.

Authors:  David J Young; Christina D Edgar; Jennifer Murphy; Johannes Fredebohm; Elizabeth S Poole; Warren P Tate
Journal:  RNA       Date:  2010-04-26       Impact factor: 4.942

2.  Single-Cell Transcriptomics Reveal a Correlation between Genome Architecture and Gene Family Evolution in Ciliates.

Authors:  Ying Yan; Xyrus X Maurer-Alcalá; Rob Knight; Sergei L Kosakovsky Pond; Laura A Katz
Journal:  mBio       Date:  2019-12-24       Impact factor: 7.867

  2 in total

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