Literature DB >> 18314584

Gene function analysis using the chicken B-cell line DT40.

Randolph B Caldwell1, Petra Fiedler, Ulrike Schoetz, Jean-Marie Buerstedde.   

Abstract

Quidquid agis, prudenter agas et respice finem!-Whatever you do, do it wisely and consider the goal. In consideration of that sage advice, the chicken B-cell line DT40 is an excellent model cell system to study the function of vertebrate genes. In addition to being highly amenable to gene manipulations, the recent influx of genome and gene/protein resources allows for the straightforward selection, design, and targeting of candidate genes for knockout analysis. This chapter will give a step by step standardized protocol to creating a gene knockout mutant in DT40. With careful consideration, the methods and protocols described herein can be easily modified to allow for further gene manipulations such as creating a knockin or a conditional mutant.

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Year:  2007        PMID: 18314584     DOI: 10.1007/978-1-59745-547-3_11

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  7 in total

1.  cis-Regulatory remodeling of the SCL locus during vertebrate evolution.

Authors:  Berthold Göttgens; Rita Ferreira; Maria-José Sanchez; Shoko Ishibashi; Juan Li; Dominik Spensberger; Pascal Lefevre; Katrin Ottersbach; Michael Chapman; Sarah Kinston; Kathy Knezevic; Maarten Hoogenkamp; George A Follows; Constanze Bonifer; Enrique Amaya; Anthony R Green
Journal:  Mol Cell Biol       Date:  2010-10-18       Impact factor: 4.272

2.  USF binding sequences from the HS4 insulator element impose early replication timing on a vertebrate replicator.

Authors:  Vahideh Hassan-Zadeh; Sabarinadh Chilaka; Jean-Charles Cadoret; Meiji Kit-Wan Ma; Nicole Boggetto; Adam G West; Marie-Noëlle Prioleau
Journal:  PLoS Biol       Date:  2012-03-06       Impact factor: 8.029

3.  Visualization of DNA replication in the vertebrate model system DT40 using the DNA fiber technique.

Authors:  Rebekka A V Schwab; Wojciech Niedzwiedz
Journal:  J Vis Exp       Date:  2011-10-27       Impact factor: 1.355

4.  Co-mutation of histone H2AX S139A with Y142A rescues Y142A-induced ionising radiation sensitivity.

Authors:  James A L Brown; John K Eykelenboom; Noel F Lowndes
Journal:  FEBS Open Bio       Date:  2012-09-29       Impact factor: 2.693

5.  A new strategy for gene targeting and functional proteomics using the DT40 cell line.

Authors:  Kinga P Orlowska; Kamila Klosowska; Roman J Szczesny; Dominik Cysewski; Pawel S Krawczyk; Andrzej Dziembowski
Journal:  Nucleic Acids Res       Date:  2013-07-27       Impact factor: 16.971

6.  Vertebrate Ssu72 regulates and coordinates 3'-end formation of RNAs transcribed by RNA polymerase II.

Authors:  Shotaro Wani; Masamichi Yuda; Yosuke Fujiwara; Masaya Yamamoto; Fumio Harada; Yoshiaki Ohkuma; Yutaka Hirose
Journal:  PLoS One       Date:  2014-08-28       Impact factor: 3.240

7.  Positive Cofactor 4 (PC4) is critical for DNA repair pathway re-routing in DT40 cells.

Authors:  Randolph B Caldwell; Herbert Braselmann; Ulrike Schoetz; Steffen Heuer; Harry Scherthan; Horst Zitzelsberger
Journal:  Sci Rep       Date:  2016-07-04       Impact factor: 4.379

  7 in total

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