Literature DB >> 18313078

Evolutionarily distinctive species often capture more phylogenetic diversity than expected.

David W Redding1, Klaas Hartmann, Aki Mimoto, Drago Bokal, Matt Devos, Arne Ø Mooers.   

Abstract

Evolutionary distinctiveness measures of how evolutionarily isolated a species is relative to other members of its clade. Recently, distinctiveness metrics that explicitly incorporate time have been proposed for conservation prioritization. However, we found that such measures differ qualitatively in how well they capture the total amount of evolution (termed phylogenetic diversity, or PD) represented by a set of species. We used simulation and simple graph theory to explore this relationship with reference to phylogenetic tree shape. Overall, the distinctiveness measures capture more PD on more unbalanced trees and on trees with many splits near the present. The rank order of performance was robust across tree shapes, with apportioning measures performing best and node-based measures performing worst. A sample of 50 ultrametric trees from the literature showed the same patterns. Taken together, this suggests that distinctiveness metrics may be a useful addition to other measures of value for conservation prioritization of species. The simplest measure, the age of a species, performed surprisingly well, suggesting that new measures that focus on tree shape near the tips may provide a transparent alternative to more complicated full-tree approaches.

Entities:  

Mesh:

Year:  2008        PMID: 18313078     DOI: 10.1016/j.jtbi.2007.12.006

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  27 in total

1.  Island phytophagy: explaining the remarkable diversity of plant-feeding insects.

Authors:  Jeffrey B Joy; Bernard J Crespi
Journal:  Proc Biol Sci       Date:  2012-05-02       Impact factor: 5.349

2.  Stochastic properties of generalised Yule models, with biodiversity applications.

Authors:  Tanja Gernhard; Klaas Hartmann; Mike Steel
Journal:  J Math Biol       Date:  2008-05-29       Impact factor: 2.259

3.  Equality of Shapley value and fair proportion index in phylogenetic trees.

Authors:  Michael Fuchs; Emma Yu Jin
Journal:  J Math Biol       Date:  2014-12-07       Impact factor: 2.259

4.  The equivalence of two phylogenetic biodiversity measures: the Shapley value and Fair Proportion index.

Authors:  Klaas Hartmann
Journal:  J Math Biol       Date:  2012-09-18       Impact factor: 2.259

5.  Reintroductions of birds and mammals involve evolutionarily distinct species at the regional scale.

Authors:  Charles Thévenin; Maud Mouchet; Alexandre Robert; Christian Kerbiriou; François Sarrazin
Journal:  Proc Natl Acad Sci U S A       Date:  2018-03-12       Impact factor: 11.205

6.  Combinatorial properties of phylogenetic diversity indices.

Authors:  Kristina Wicke; Mike Steel
Journal:  J Math Biol       Date:  2019-10-29       Impact factor: 2.259

7.  Accumulation over evolutionary time as a major cause of biodiversity hotspots in conifers.

Authors:  Mekala Sundaram; Michael J Donoghue; Aljos Farjon; Denis Filer; Sarah Mathews; Walter Jetz; Andrew B Leslie
Journal:  Proc Biol Sci       Date:  2019-10-09       Impact factor: 5.349

8.  Investing in evolutionary history: implementing a phylogenetic approach for mammal conservation.

Authors:  Ben Collen; Samuel T Turvey; Carly Waterman; Helen M R Meredith; Tyler S Kuhn; Jonathan E M Baillie; Nick J B Isaac
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2011-09-27       Impact factor: 6.237

9.  Spatial phylogenetics of butterflies in relation to environmental drivers and angiosperm diversity across North America.

Authors:  Chandra Earl; Michael W Belitz; Shawn W Laffan; Vijay Barve; Narayani Barve; Douglas E Soltis; Julie M Allen; Pamela S Soltis; Brent D Mishler; Akito Y Kawahara; Robert Guralnick
Journal:  iScience       Date:  2021-03-23

10.  Threatened reef corals of the world.

Authors:  Danwei Huang
Journal:  PLoS One       Date:  2012-03-30       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.