Literature DB >> 18310241

Stochastic receptor expression allows sensitive bacteria to evade phage attack. Part II: theoretical analyses.

E Chapman-McQuiston1, X L Wu.   

Abstract

Stochastic gene expression in bacteria can create a diverse protein distribution. Most of the current studies have focused on fluctuations around the mean, which constitutes the majority of a bacterial population. However, when the bacterial population is subject to a severe selection pressure, it is the properties of the minority cells that determine the fate of the population. The central question is whether phenotype heterogeneity, such as a spread in the expression level of a critical protein, is sufficient to account for the persistence of the bacteria under the selection. A related question is how long such persistence can last before genetic mutation becomes significant. In this work, survival statistics of a bacterial population with a diverse phage-receptor number distribution is theoretically investigated when the cells are subject to phage pressures. The calculations are compared with our experimental observations presented in Part I in this issue. The fundamental basis of our analysis is the Berg-Purcell theoretical result for the reaction rate between a phage particle and a bacterium with a discrete number of receptors, and the observation that most phage-resistant mutants isolated in laboratory cultures are defective in phage binding. It is shown that a heterogeneous bacterial population is significantly more fit compared to a homogeneous population when confronting a phage attack.

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Year:  2008        PMID: 18310241      PMCID: PMC2480678          DOI: 10.1529/biophysj.107.121723

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  21 in total

1.  Stochastic gene expression in fluctuating environments.

Authors:  Mukund Thattai; Alexander van Oudenaarden
Journal:  Genetics       Date:  2004-05       Impact factor: 4.562

2.  Bacterial persistence as a phenotypic switch.

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Journal:  Science       Date:  2004-08-12       Impact factor: 47.728

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Authors:  Sandeep Krishna; Bidisha Banerjee; T V Ramakrishnan; G V Shivashankar
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-16       Impact factor: 11.205

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Journal:  J Bacteriol       Date:  1975-04       Impact factor: 3.490

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Authors:  Long Cai; Nir Friedman; X Sunney Xie
Journal:  Nature       Date:  2006-03-16       Impact factor: 49.962

6.  Bacterial debris-an ecological mechanism for coexistence of bacteria and their viruses.

Authors:  Avinoam Rabinovitch; Ira Aviram; Arieh Zaritsky
Journal:  J Theor Biol       Date:  2003-10-07       Impact factor: 2.691

7.  Diffusion-controlled ligand binding to spheres partially covered by receptors: an effective medium treatment.

Authors:  R Zwanzig
Journal:  Proc Natl Acad Sci U S A       Date:  1990-08       Impact factor: 11.205

8.  Gene expression from plasmids containing the araBAD promoter at subsaturating inducer concentrations represents mixed populations.

Authors:  D A Siegele; J C Hu
Journal:  Proc Natl Acad Sci U S A       Date:  1997-07-22       Impact factor: 11.205

9.  Bacterial persistence: a model of survival in changing environments.

Authors:  Edo Kussell; Roy Kishony; Nathalie Q Balaban; Stanislas Leibler
Journal:  Genetics       Date:  2005-01-31       Impact factor: 4.562

10.  Expression of malT, the regulator gene of the maltose region in Escherichia coli, is limited both at transcription and translation.

Authors:  C Chapon
Journal:  EMBO J       Date:  1982       Impact factor: 11.598

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  6 in total

Review 1.  Phenotypic flux: The role of physiology in explaining the conundrum of bacterial persistence amid phage attack.

Authors:  Claudia Igler
Journal:  Virus Evol       Date:  2022-09-15

2.  Virus wars: using one virus to block the spread of another.

Authors:  Matthew L Paff; Scott L Nuismer; Andrew Ellington; Ian J Molineux; James J Bull
Journal:  PeerJ       Date:  2016-06-29       Impact factor: 2.984

Review 3.  Mechanisms and clinical importance of bacteriophage resistance.

Authors:  Julia E Egido; Ana Rita Costa; Cristian Aparicio-Maldonado; Pieter-Jan Haas; Stan J J Brouns
Journal:  FEMS Microbiol Rev       Date:  2022-02-09       Impact factor: 16.408

4.  Phage-Bacterial Dynamics with Spatial Structure: Self Organization around Phage Sinks Can Promote Increased Cell Densities.

Authors:  James J Bull; Kelly A Christensen; Carly Scott; Benjamin R Jack; Cameron J Crandall; Stephen M Krone
Journal:  Antibiotics (Basel)       Date:  2018-01-29

5.  Gene Expression Changes with Minor Effects on the Population Average Have Major Effects on the Occurrence of Cells with Extreme Protein Concentrations.

Authors:  Mikkel Skjoldan Svenningsen; Szabolcs Semsey; Namiko Mitarai
Journal:  mSphere       Date:  2019-01-30       Impact factor: 4.389

6.  Sustainability of spatially distributed bacteria-phage systems.

Authors:  Rasmus Skytte Eriksen; Namiko Mitarai; Kim Sneppen
Journal:  Sci Rep       Date:  2020-02-21       Impact factor: 4.379

  6 in total

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