Literature DB >> 18308532

Phylogenetic relationships of graminicolous downy mildews based on cox2 sequence data.

Marco Thines1, Markus Göker, Sabine Telle, Malcolm Ryley, Kusum Mathur, Yaladabagi D Narayana, Otmar Spring, Ram P Thakur.   

Abstract

Graminicolous downy mildews (GDM) are an understudied, yet economically important, group of plant pathogens, which are one of the major constraints to poaceous crops in the tropics and subtropics. Here we present a first molecular phylogeny based on cox2 sequences comprising all genera of the GDM currently accepted, with both lasting (Graminivora, Poakatesthia, and Viennotia) and evanescent (Peronosclerospora, Sclerophthora, and Sclerospora) sporangiophores. In addition, all other downy mildew genera currently accepted, as well as a representative sample of other oomycete taxa, have been included. It was shown that all genera of the GDM have had a long, independent evolutionary history, and that the delineation between Peronosclerospora and Sclerospora is correct. Sclerophthora was found to be a particularly divergent taxon nested within a paraphyletic Phytophthora, but without support. The results confirm that the placement of Peronosclerospora and Sclerospora in the Saprolegniomycetidae is incorrect. Sclerophthora is not closely related to Pachymetra of the family Verrucalvaceae, and also does not belong to the Saprolegniomycetidae, but shows close affinities to the Peronosporaceae. In addition, all GDM are interspersed throughout the Peronosporaceae s lat., suggesting that a separate family for the Sclerosporaceae might not be justified.

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Year:  2007        PMID: 18308532     DOI: 10.1016/j.mycres.2007.10.010

Source DB:  PubMed          Journal:  Mycol Res        ISSN: 0953-7562


  11 in total

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2.  Peronosporaceae species causing downy mildew diseases of Poaceae, including nomenclature revisions and diagnostic resources.

Authors:  J A Crouch; W J Davis; N Shishkoff; V L Castroagudín; F Martin; R Michelmore; M Thines
Journal:  Fungal Syst Evol       Date:  2022-04-08

3.  Phytophthora: an ancient, historic, biologically and structurally cohesive and evolutionarily successful generic concept in need of preservation.

Authors:  Clive Brasier; Bruno Scanu; David Cooke; Thomas Jung
Journal:  IMA Fungus       Date:  2022-06-27       Impact factor: 8.044

4.  A new species of Albugo parasitic to Arabidopsis thaliana reveals new evolutionary patterns in white blister rusts (Albuginaceae).

Authors:  M Thines; Y-J Choi; E Kemen; S Ploch; E B Holub; H-D Shin; J D G Jones
Journal:  Persoonia       Date:  2009-05-26       Impact factor: 11.051

5.  The inclusion of downy mildews in a multi-locus-dataset and its reanalysis reveals a high degree of paraphyly in Phytophthora.

Authors:  Fabian Runge; Sabine Telle; Sebastian Ploch; Elizabeth Savory; Brad Day; Rahul Sharma; Marco Thines
Journal:  IMA Fungus       Date:  2011-11-11       Impact factor: 3.515

6.  Multiple origins of downy mildews and mito-nuclear discordance within the paraphyletic genus Phytophthora.

Authors:  Tyler B Bourret; Robin A Choudhury; Heather K Mehl; Cheryl L Blomquist; Neil McRoberts; David M Rizzo
Journal:  PLoS One       Date:  2018-03-12       Impact factor: 3.240

7.  A revision of Salispina, its placement in a new family, Salispinaceae (Rhipidiales), and description of a fourth species, S. hoi sp. nov.

Authors:  Reuel M Bennett; Mark Kevin Devanadera; Gina R Dedeles
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8.  Towards a universal barcode of oomycetes--a comparison of the cox1 and cox2 loci.

Authors:  Young-Joon Choi; Gordon Beakes; Sally Glockling; Julia Kruse; Bora Nam; Lisa Nigrelli; Sebastian Ploch; Hyeon-Dong Shin; Roger G Shivas; Sabine Telle; Hermann Voglmayr; Marco Thines
Journal:  Mol Ecol Resour       Date:  2015-03-24       Impact factor: 7.090

9.  Bridging the gulf: Phytophthora and downy mildews are connected by rare grass parasites.

Authors:  Marco Thines
Journal:  PLoS One       Date:  2009-03-10       Impact factor: 3.240

10.  Baobabopsis, a new genus of graminicolous downy mildews from tropical Australia, with an updated key to the genera of downy mildews.

Authors:  Marco Thines; Sabine Telle; Young-Joon Choi; Yu Pei Tan; Roger G Shivas
Journal:  IMA Fungus       Date:  2015-11-25       Impact factor: 3.515

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