| Literature DB >> 18304934 |
Jongsun Park1, Jaejin Park, Suwang Jang, Seryun Kim, Sunghyung Kong, Jaeyoung Choi, Kyohun Ahn, Juhyeon Kim, Seungmin Lee, Sunggon Kim, Bongsoo Park, Kyongyong Jung, Soonok Kim, Seogchan Kang, Yong-Hwan Lee.
Abstract
SUMMARY: Genomes of more than 60 fungal species have been sequenced to date, yet there has been no systematic approach to analyze fungal transcription factors (TFs) kingdom widely. We developed a standardized pipeline for annotating TFs in fungal genomes. Resulting data have been archived in a new database termed the Fungal Transcription Factor Database (FTFD). In FTFD, 31,832 putative fungal TFs, identified from 62 fungal and 3 Oomycete species, were classified into 61 families and phylogenetically analyzed. The FTFD will serve as a community resource supporting comparative analyses of the distribution and domain structure of TFs within and across species. AVAILABILITY: All data described in this study can be browsed through the FTFD web site at http://ftfd.snu.ac.kr/.Mesh：
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Year: 2008 PMID： 18304934 DOI： 10.1093/bioinformatics/btn058
Source DB: PubMed Journal: Bioinformatics ISSN： 1367-4803 Impact factor: 6.937