Literature DB >> 18304447

Identification of genetic polymorphisms in FABP3 and FABP4 and putative association with back fat thickness in Korean native cattle.

Seoae Cho1, Tae Sung Park, Du-Hak Yoon, Hyun Sub Cheong, Sohg Namgoong, Byung Lae Park, Hye Won Lee, Chang Soo Han, Eun Mi Kim, Il-Cheong Cheong, Heebal Kim, Hyoung Doo Shin.   

Abstract

The aim of this study was to determine whether single nucleotide polymorphisms (SNP) in the beef cattle adipocyte fatty-acid binding protein 3 and 4 (FABP3 and FABP4) genes are associated with carcass weight (CW) and back fat thickness (BF) of beef cattle. By direct DNA sequencing in 24 unrelated Korean native cattle, we identified 20 SNPs in FABP3 and FABP4. Among them, 10 polymorphic sites were selected for genotyping in our beef cattle. We performed SNP, haplotype and linkage disequilibrium studies on 419 Korean native cattle with the 10 SNPs in the FABP genes. Statistical analysis revealed that 220AG (I74V) and 348+303TC polymorphisms in FABP4 showed putative associations with BF traits (P=0.02 and 0.01, respectively). Our findings suggest that the polymorphisms in FABP4 may play a role in determining one of the important genetic factors that influence BF in beef cattle.

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Year:  2008        PMID: 18304447     DOI: 10.5483/bmbrep.2008.41.1.029

Source DB:  PubMed          Journal:  BMB Rep        ISSN: 1976-6696            Impact factor:   4.778


  16 in total

1.  Polymorphisms in fatty acid binding protein 5 show association with type 2 diabetes.

Authors:  Liming Bu; Lorena M Salto; Kevin J De Leon; Marino De Leon
Journal:  Diabetes Res Clin Pract       Date:  2011-02-01       Impact factor: 5.602

2.  Heart-type fatty acid-binding protein is essential for efficient brown adipose tissue fatty acid oxidation and cold tolerance.

Authors:  Laurent Vergnes; Robert Chin; Stephen G Young; Karen Reue
Journal:  J Biol Chem       Date:  2010-11-01       Impact factor: 5.157

Review 3.  A critical analysis of production-associated DNA polymorphisms in the genes of cattle, goat, sheep, and pig.

Authors:  Eveline M Ibeagha-Awemu; Patrick Kgwatalala; Xin Zhao
Journal:  Mamm Genome       Date:  2008-10-04       Impact factor: 2.957

4.  Identification of polymorphism in fatty acid binding protein 3 (FABP3) gene and its association with milk fat traits in riverine buffalo (Bubalus bubalis).

Authors:  Praveen Kumar Dubey; Shubham Goyal; Shailendra Kumar Mishra; Reena Arora; Manishi Mukesh; Saket Kumar Niranjan; Periasamy Kathiravan; Ranjit Singh Kataria
Journal:  Trop Anim Health Prod       Date:  2016-02-19       Impact factor: 1.559

5.  Association of five candidate genes with fatty acid composition in Korean cattle.

Authors:  D Maharani; Y Jung; W Y Jung; C Jo; S H Ryoo; S H Lee; S H Yeon; J H Lee
Journal:  Mol Biol Rep       Date:  2012-01-06       Impact factor: 2.316

6.  Variation in the bovine FABP4 gene affects milk yield and milk protein content in dairy cows.

Authors:  H Zhou; L Cheng; W Azimu; S Hodge; G R Edwards; J G H Hickford
Journal:  Sci Rep       Date:  2015-06-12       Impact factor: 4.379

7.  Identification of the SNP (Single Nucleotide Polymorphism) for Fatty Acid Composition Associated with Beef Flavor-related FABP4 (Fatty Acid Binding Protein 4) in Korean Cattle.

Authors:  Dong-Yep Oh; Yoon-Seok Lee; Boo-Mi La; Jung-Sou Yeo
Journal:  Asian-Australas J Anim Sci       Date:  2012-07       Impact factor: 2.509

8.  Expression of genes controlling fat deposition in two genetically diverse beef cattle breeds fed high or low silage diets.

Authors:  Ana Sofia Henriques da Costa; Virgínia Maria Rico Pires; Carlos Mendes Godinho Andrade Fontes; José António Mestre Prates
Journal:  BMC Vet Res       Date:  2013-06-17       Impact factor: 2.741

9.  Association between fatty acid compositions and genotypes of FABP4 and LXR-alpha in Japanese black cattle.

Authors:  Shogo Hoashi; Tomoko Hinenoya; Atsuko Tanaka; Hideki Ohsaki; Shinji Sasazaki; Masaaki Taniguchi; Kenji Oyama; Fumio Mukai; Hideyuki Mannen
Journal:  BMC Genet       Date:  2008-12-11       Impact factor: 2.797

10.  Whole-genome resequencing of Hanwoo (Korean cattle) and insight into regions of homozygosity.

Authors:  Kyung-Tai Lee; Won-Hyong Chung; Sung-Yeoun Lee; Jung-Woo Choi; Jiwoong Kim; Dajeong Lim; Seunghwan Lee; Gul-Won Jang; Bumsoo Kim; Yun Ho Choy; Xiaoping Liao; Paul Stothard; Stephen S Moore; Sang-Heon Lee; Sungmin Ahn; Namshin Kim; Tae-Hun Kim
Journal:  BMC Genomics       Date:  2013-07-30       Impact factor: 3.969

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