Literature DB >> 18301394

Identifying blood biomarkers for mood disorders using convergent functional genomics.

H Le-Niculescu1, S M Kurian, N Yehyawi, C Dike, S D Patel, H J Edenberg, M T Tsuang, D R Salomon, J I Nurnberger, A B Niculescu.   

Abstract

There are to date no objective clinical laboratory blood tests for mood disorders. The current reliance on patient self-report of symptom severity and on the clinicians' impression is a rate-limiting step in effective treatment and new drug development. We propose, and provide proof of principle for, an approach to help identify blood biomarkers for mood state. We measured whole-genome gene expression differences in blood samples from subjects with bipolar disorder that had low mood vs those that had high mood at the time of the blood draw, and separately, changes in gene expression in brain and blood of a mouse pharmacogenomic model. We then integrated our human blood gene expression data with animal model gene expression data, human genetic linkage/association data and human postmortem brain data, an approach called convergent functional genomics, as a Bayesian strategy for cross-validating and prioritizing findings. Topping our list of candidate blood biomarker genes we have five genes involved in myelination (Mbp, Edg2, Mag, Pmp22 and Ugt8), and six genes involved in growth factor signaling (Fgfr1, Fzd3, Erbb3, Igfbp4, Igfbp6 and Ptprm). All of these genes have prior evidence of differential expression in human postmortem brains from mood disorder subjects. A predictive score developed based on a panel of 10 top candidate biomarkers (five for high mood and five for low mood) shows sensitivity and specificity for high mood and low mood states, in two independent cohorts. Our studies suggest that blood biomarkers may offer an unexpectedly informative window into brain functioning and disease state.

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Year:  2008        PMID: 18301394     DOI: 10.1038/mp.2008.11

Source DB:  PubMed          Journal:  Mol Psychiatry        ISSN: 1359-4184            Impact factor:   15.992


  79 in total

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Authors:  Heath D Schmidt; Richard C Shelton; Ronald S Duman
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2.  Convergent Functional Genomics: what we have learned and can learn about genes, pathways, and mechanisms.

Authors:  Alexander B Niculescu; Helen Le-Niculescu
Journal:  Neuropsychopharmacology       Date:  2010-01       Impact factor: 7.853

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Journal:  Mol Neurobiol       Date:  2016-08-25       Impact factor: 5.590

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Journal:  Mol Cell Proteomics       Date:  2010-05-25       Impact factor: 5.911

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