Literature DB >> 18298042

tmRNA abundance in Streptomyces aureofaciens, S. griseus and S. collinus under stress-inducing conditions.

P Palecková1, J Felsberg, J Bobek, K Mikulík.   

Abstract

tmRNA and protein SmpB are the main components required for rescue of stalled ribosomes incapable of properly elongating or terminating the polypeptide chain. We examined the tmRNA level and protein synthesis in Streptomyces aureofaciens, S. griseus and S. collinus synthesizing tetracycline, streptomycin and kirromycin, respectively, during various stress conditions. Downshift in temperature caused a decrease in protein synthesis but the level of tmRNA increased. Shift up in temperature induced decay of tmRNA in all strains and in S. collinus led to stimulation and in S. aureofaciens and S. griseus to inhibition of protein synthesis. At high NaCl concentrations protein synthesis was inhibited and tmRNA decayed. Shift in pH from 7.0 to 5.0 had no pronounced effect on the tmRNA level while upshift to pH 9.0 in S. collinus and S. aureofaciens caused inhibition of protein synthesis and decay of tmRNA in S. collinus. In contrast, protein synthesis and tmRNA level increased in S. griseus at the alkaline pH. Our data show that tmRNA abundance is important for survival of streptomycetes under certain unfavorable conditions.

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Year:  2007        PMID: 18298042     DOI: 10.1007/bf02932105

Source DB:  PubMed          Journal:  Folia Microbiol (Praha)        ISSN: 0015-5632            Impact factor:   2.099


  28 in total

1.  SsrA-mediated peptide tagging caused by rare codons and tRNA scarcity.

Authors:  E D Roche; R T Sauer
Journal:  EMBO J       Date:  1999-08-16       Impact factor: 11.598

2.  SmpB, a unique RNA-binding protein essential for the peptide-tagging activity of SsrA (tmRNA).

Authors:  A W Karzai; M M Susskind; R T Sauer
Journal:  EMBO J       Date:  1999-07-01       Impact factor: 11.598

3.  Bacterial SsrA system plays a role in coping with unwanted translational readthrough caused by suppressor tRNAs.

Authors:  Koji Ueda; Yasufumi Yamamoto; Kazuko Ogawa; Tatsuhiko Abo; Hachiro Inokuchi; Hiroji Aiba
Journal:  Genes Cells       Date:  2002-05       Impact factor: 1.891

4.  Expression of the Csp protein family upon cold shock and production of tetracycline in Streptomyces aureofaciens.

Authors:  K Mikulík; Q Khanh-Hoang; P Halada; S Bezousková; O Benada; V Bêhal
Journal:  Biochem Biophys Res Commun       Date:  1999-11-19       Impact factor: 3.575

5.  Acid- and base-induced proteins during aerobic and anaerobic growth of Escherichia coli revealed by two-dimensional gel electrophoresis.

Authors:  D Blankenhorn; J Phillips; J L Slonczewski
Journal:  J Bacteriol       Date:  1999-04       Impact factor: 3.490

6.  Cytoplasmic degradation of ssrA-tagged proteins.

Authors:  Christopher M Farrell; Alan D Grossman; Robert T Sauer
Journal:  Mol Microbiol       Date:  2005-09       Impact factor: 3.501

7.  Requirement of transfer-messenger RNA for the growth of Bacillus subtilis under stresses.

Authors:  A Muto; A Fujihara; K I Ito; J Matsuno; C Ushida; H Himeno
Journal:  Genes Cells       Date:  2000-08       Impact factor: 1.891

8.  Stop codons preceded by rare arginine codons are efficient determinants of SsrA tagging in Escherichia coli.

Authors:  Christopher S Hayes; Baundauna Bose; Robert T Sauer
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-12       Impact factor: 11.205

9.  pH-dependent expression of periplasmic proteins and amino acid catabolism in Escherichia coli.

Authors:  Lauren M Stancik; Dawn M Stancik; Brian Schmidt; D Michael Barnhart; Yuliya N Yoncheva; Joan L Slonczewski
Journal:  J Bacteriol       Date:  2002-08       Impact factor: 3.490

10.  A tRNA-like structure is present in 10Sa RNA, a small stable RNA from Escherichia coli.

Authors:  Y Komine; M Kitabatake; T Yokogawa; K Nishikawa; H Inokuchi
Journal:  Proc Natl Acad Sci U S A       Date:  1994-09-27       Impact factor: 11.205

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  3 in total

Review 1.  General and molecular microbiology and microbial genetics in the IM CAS.

Authors:  Jan Nešvera
Journal:  J Ind Microbiol Biotechnol       Date:  2010-11-18       Impact factor: 3.346

Review 2.  tmRNA-mediated trans-translation as the major ribosome rescue system in a bacterial cell.

Authors:  Hyouta Himeno; Daisuke Kurita; Akira Muto
Journal:  Front Genet       Date:  2014-04-07       Impact factor: 4.599

3.  RNase III-Binding-mRNAs Revealed Novel Complementary Transcripts in Streptomyces.

Authors:  Dita Šetinová; Klára Šmídová; Pavel Pohl; Inesa Musić; Jan Bobek
Journal:  Front Microbiol       Date:  2018-01-15       Impact factor: 5.640

  3 in total

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