Literature DB >> 18296412

Inverted replication of vertebrate mitochondria.

Miguel M Fonseca, David Posada, D James Harris.   

Abstract

After analyzing the base composition asymmetry of coding regions in vertebrate mitochondria, we identified 2 fishes, Albula glossodonta and Bathygadus antrodes, with inverted compositional patterns. Both species appear to have an unusual control region (CR), and in B. antrodes, it has switched from the light strand to the heavy strand. To our knowledge, this is the first report in vertebrates of inverted mitochondrial replication, caused by an inversion of the CR. These findings support the strand-asymmetric model of mtDNA replication and suggest that vertebrate mtDNA can tolerate globally reversed mutational pressures. In addition, we propose that nucleotide bias is not strand specific but that it depends on the location of the CR.

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Year:  2008        PMID: 18296412     DOI: 10.1093/molbev/msn050

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  18 in total

1.  Nucleotide composition of CO1 sequences in Chelicerata (Arthropoda): detecting new mitogenomic rearrangements.

Authors:  Juliette Arabi; Mark L I Judson; Louis Deharveng; Wilson R Lourenço; Corinne Cruaud; Alexandre Hassanin
Journal:  J Mol Evol       Date:  2012-02-24       Impact factor: 2.395

2.  Mutational bias plays an important role in shaping longevity-related amino acid content in mammalian mtDNA-encoded proteins.

Authors:  Juan Carlos Aledo; Héctor Valverde; João Pedro de Magalhães
Journal:  J Mol Evol       Date:  2012-06-30       Impact factor: 2.395

3.  Comparative mitochondrial genomics of freshwater mussels (Bivalvia: Unionoida) with doubly uniparental inheritance of mtDNA: gender-specific open reading frames and putative origins of replication.

Authors:  Sophie Breton; Hélène Doucet Beaupré; Donald T Stewart; Helen Piontkivska; Moumita Karmakar; Arthur E Bogan; Pierre U Blier; Walter R Hoeh
Journal:  Genetics       Date:  2009-10-12       Impact factor: 4.562

4.  Complete mitochondrial genome from South American catfish Pseudoplatystoma reticulatum (Eigenmann & Eigenmann) and its impact in Siluriformes phylogenetic tree.

Authors:  Luciana Cristine Vasques Villela; Anderson Luis Alves; Eduardo Sousa Varela; Michel Eduardo Beleza Yamagishi; Poliana Fernanda Giachetto; Naiara Milagres Augusto da Silva; Josi Margarete Ponzetto; Samuel Rezende Paiva; Alexandre Rodrigues Caetano
Journal:  Genetica       Date:  2017-02-03       Impact factor: 1.082

5.  Comparative mitogenomics of Braconidae (Insecta: Hymenoptera) and the phylogenetic utility of mitochondrial genomes with special reference to Holometabolous insects.

Authors:  Shu-jun Wei; Min Shi; Michael J Sharkey; Cornelis van Achterberg; Xue-xin Chen
Journal:  BMC Genomics       Date:  2010-06-11       Impact factor: 3.969

6.  New views on strand asymmetry in insect mitochondrial genomes.

Authors:  Shu-Jun Wei; Min Shi; Xue-Xin Chen; Michael J Sharkey; Cornelis van Achterberg; Gong-Yin Ye; Jun-Hua He
Journal:  PLoS One       Date:  2010-09-15       Impact factor: 3.240

7.  Base-pairing versatility determines wobble sites in tRNA anticodons of vertebrate mitogenomes.

Authors:  Miguel M Fonseca; Sara Rocha; David Posada
Journal:  PLoS One       Date:  2012-05-09       Impact factor: 3.240

8.  Tandem Duplication and Random Loss for mitogenome rearrangement in Symphurus (Teleost: Pleuronectiformes).

Authors:  Wei Shi; Li Gong; Shu-Ying Wang; Xian-Guang Miao; Xiao-Yu Kong
Journal:  BMC Genomics       Date:  2015-05-06       Impact factor: 3.969

9.  Afrobatrachian mitochondrial genomes: genome reorganization, gene rearrangement mechanisms, and evolutionary trends of duplicated and rearranged genes.

Authors:  Atsushi Kurabayashi; Masayuki Sumida
Journal:  BMC Genomics       Date:  2013-09-21       Impact factor: 3.969

10.  Coding constraints modulate chemically spontaneous mutational replication gradients in mitochondrial genomes.

Authors:  Hervé Seligmann
Journal:  Curr Genomics       Date:  2012-03       Impact factor: 2.236

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