Literature DB >> 18295961

Helix-rich transient and equilibrium intermediates of equine beta-lactoglobulin in alkaline buffer.

Yoshitaka Matsumura1, Jinsong Li, Masamichi Ikeguchi, Hiroshi Kihara.   

Abstract

Acidic buffer conditions are known to stabilize helix-rich states of even those proteins with a predominantly beta-sheet native secondary structure. Here we investigated whether such states also exist under alkaline buffer conditions. The guanidine hydrochloride (GuHCl)-induced unfolding transition and kinetic refolding of equine beta-lactoglobulin (ELG) by GuHCl-jump were investigated at pH 8.7 by far-ultraviolet circular dichroism. We found that an equilibrium intermediate appeared in 45% ethylene glycol (EGOH) buffer with 1.5 M GuHCl. The intermediate is rich in non-native alpha-helix, which is similar to the helix-rich state of ELG at pH 4.0. A kinetic study was done on the folding rate of ELG and compared with bovine beta-lactoglobulin (BLG). Transient intermediates, which were observed as the burst phase of the refolding reaction, were also rich in alpha-helix. The activation enthalpy of ELG was calculated to be c.a. 80 kJ/mol, whereas that of BLG was c.a. 70 kJ/mol in the presence of 45% EGOH. The ellipticities of the transient intermediate of ELG show temperature dependence in the presence of 45% EGOH, whereas that of BLG did not show significant dependence. This study therefore extends the existence of helix-rich equilibrium and transient intermediates of predominantly beta-sheet proteins to alkaline buffer conditions.

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Year:  2008        PMID: 18295961     DOI: 10.1016/j.bpc.2008.01.010

Source DB:  PubMed          Journal:  Biophys Chem        ISSN: 0301-4622            Impact factor:   2.352


  3 in total

1.  Transient helical structure during PI3K and Fyn SH3 domain folding.

Authors:  Yoshitaka Matsumura; Masaji Shinjo; Seung Joong Kim; Nobuyuki Okishio; Martin Gruebele; Hiroshi Kihara
Journal:  J Phys Chem B       Date:  2013-04-18       Impact factor: 2.991

2.  Structural study of hNck2 SH3 domain protein in solution by circular dichroism and X-ray solution scattering.

Authors:  Yoshitaka Matsumura; Masaji Shinjo; Tsutomu Matsui; Kaoru Ichimura; Jianxing Song; Hiroshi Kihara
Journal:  Biophys Chem       Date:  2013-02-26       Impact factor: 2.352

3.  α-helix formation rate of oligopeptides at subzero temperatures.

Authors:  Zhi-Jie Qin; Akio Shimizu; Jinsong Li; Masamichi Ikeguchi; Masaji Shinjo; Hiroshi Kihara
Journal:  Biophysics (Nagoya-shi)       Date:  2014-02-18
  3 in total

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