Literature DB >> 18294969

Hunting G-quadruplexes.

J L Huppert1.   

Abstract

Whilst DNA spends much of its time in the double-stranded form, frequently in storage, wrapped around histones and packaged as chromatin, it can also form other complex structures, which may play a role in natural regulation and gene control. These alternative structures therefore also present an interesting novel series of targets for artificial intervention, and so may lead to novel therapeutics. In this review, I describe the current understanding of how genomic and bioinformatics studies may be used to understand the roles that one such structure, the four-stranded guanine-rich G-quadruplex, may play in the genome, and outline how these may be considered as targets for intervention. I will also describe recent work looking at RNA G-quadruplexes, and the biological roles they may play.

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Year:  2008        PMID: 18294969     DOI: 10.1016/j.biochi.2008.01.014

Source DB:  PubMed          Journal:  Biochimie        ISSN: 0300-9084            Impact factor:   4.079


  59 in total

1.  Unusual salt-induced behaviour of guanine-rich natural DNA evidenced by dynamic light scattering.

Authors:  Massimo Zimbone; Gabriele Bonaventura; Pietro Baeri; Maria Luisa Barcellona
Journal:  Eur Biophys J       Date:  2012-02-19       Impact factor: 1.733

2.  Downregulation of the WT1 gene expression via TMPyP4 stabilization of promoter G-quadruplexes in leukemia cells.

Authors:  Saeedeh Ghazaey Zidanloo; Abasalt Hosseinzadeh Colagar; Hossein Ayatollahi; Jahan-Bakhsh Raoof
Journal:  Tumour Biol       Date:  2016-01-27

Review 3.  Molecular analyses of DNA helicases involved in the replicational stress response.

Authors:  Yuliang Wu; Joshua A Sommers; Avvaru N Suhasini; Monika Aggarwal; Robert M Brosh
Journal:  Methods       Date:  2010-02-25       Impact factor: 3.608

4.  The i-motif in the bcl-2 P1 promoter forms an unexpectedly stable structure with a unique 8:5:7 loop folding pattern.

Authors:  Samantha Kendrick; Yoshitsugu Akiyama; Sidney M Hecht; Laurence H Hurley
Journal:  J Am Chem Soc       Date:  2009-12-09       Impact factor: 15.419

5.  Characterization of a K+-induced conformational switch in a human telomeric DNA oligonucleotide using 2-aminopurine fluorescence.

Authors:  Robert D Gray; Luigi Petraccone; John O Trent; Jonathan B Chaires
Journal:  Biochemistry       Date:  2010-01-12       Impact factor: 3.162

Review 6.  Sequence-non-specific effects of RNA interference triggers and microRNA regulators.

Authors:  Marta Olejniczak; Paulina Galka; Wlodzimierz J Krzyzosiak
Journal:  Nucleic Acids Res       Date:  2009-10-20       Impact factor: 16.971

7.  Direct experimental evidence for quadruplex-quadruplex interaction within the human ILPR.

Authors:  Joseph D Schonhoft; Rabindra Bajracharya; Soma Dhakal; Zhongbo Yu; Hanbin Mao; Soumitra Basu
Journal:  Nucleic Acids Res       Date:  2009-03-25       Impact factor: 16.971

Review 8.  Applications of isothermal titration calorimetry in biophysical studies of G-quadruplexes.

Authors:  Bruno Pagano; Carlo Andrea Mattia; Concetta Giancola
Journal:  Int J Mol Sci       Date:  2009-07-02       Impact factor: 6.208

9.  Stability of intramolecular quadruplexes: sequence effects in the central loop.

Authors:  Aurore Guédin; Patrizia Alberti; Jean-Louis Mergny
Journal:  Nucleic Acids Res       Date:  2009-07-06       Impact factor: 16.971

10.  The G-quadruplex ligand telomestatin impairs binding of topoisomerase IIIalpha to G-quadruplex-forming oligonucleotides and uncaps telomeres in ALT cells.

Authors:  Nassima Temime-Smaali; Lionel Guittat; Assitan Sidibe; Kazuo Shin-ya; Chantal Trentesaux; Jean-François Riou
Journal:  PLoS One       Date:  2009-09-09       Impact factor: 3.240

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