Literature DB >> 18292341

NADP regulates the yeast GAL induction system.

P Rajesh Kumar1, Yao Yu, Rolf Sternglanz, Stephen Albert Johnston, Leemor Joshua-Tor.   

Abstract

Transcriptional regulation of the galactose-metabolizing genes in Saccharomyces cerevisiae depends on three core proteins: Gal4p, the transcriptional activator that binds to upstream activating DNA sequences (UAS(GAL)); Gal80p, a repressor that binds to the carboxyl terminus of Gal4p and inhibits transcription; and Gal3p, a cytoplasmic transducer that, upon binding galactose and adenosine 5'-triphosphate, relieves Gal80p repression. The current model of induction relies on Gal3p sequestering Gal80p in the cytoplasm. However, the rapid induction of this system implies that there is a missing factor. Our structure of Gal80p in complex with a peptide from the carboxyl-terminal activation domain of Gal4p reveals the existence of a dinucleotide that mediates the interaction between the two. Biochemical and in vivo experiments suggests that nicotinamide adenine dinucleotide phosphate (NADP) plays a key role in the initial induction event.

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Year:  2008        PMID: 18292341      PMCID: PMC2726985          DOI: 10.1126/science.1151903

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  11 in total

1.  Peptides selected to bind the Gal80 repressor are potent transcriptional activation domains in yeast.

Authors:  Y Han; T Kodadek
Journal:  J Biol Chem       Date:  2000-05-19       Impact factor: 5.157

2.  Regulation of clock and NPAS2 DNA binding by the redox state of NAD cofactors.

Authors:  J Rutter; M Reick; L C Wu; S L McKnight
Journal:  Science       Date:  2001-07-05       Impact factor: 47.728

3.  Understanding a transcriptional paradigm at the molecular level. The structure of yeast Gal80p.

Authors:  James B Thoden; Christopher A Sellick; Richard J Reece; Hazel M Holden
Journal:  J Biol Chem       Date:  2006-11-22       Impact factor: 5.157

4.  Separation of DNA binding from the transcription-activating function of a eukaryotic regulatory protein.

Authors:  L Keegan; G Gill; M Ptashne
Journal:  Science       Date:  1986-02-14       Impact factor: 47.728

5.  Transcription corepressor CtBP is an NAD(+)-regulated dehydrogenase.

Authors:  Vivek Kumar; Justin E Carlson; Kenneth A Ohgi; Thomas A Edwards; David W Rose; Carlos R Escalante; Michael G Rosenfeld; Aneel K Aggarwal
Journal:  Mol Cell       Date:  2002-10       Impact factor: 17.970

Review 6.  Transcriptional control of the GAL/MEL regulon of yeast Saccharomyces cerevisiae: mechanism of galactose-mediated signal transduction.

Authors:  P J Bhat; T V Murthy
Journal:  Mol Microbiol       Date:  2001-06       Impact factor: 3.501

7.  The carboxy-terminal 30 amino acids of GAL4 are recognized by GAL80.

Authors:  J Ma; M Ptashne
Journal:  Cell       Date:  1987-07-03       Impact factor: 41.582

8.  Interaction of positive and negative regulatory proteins in the galactose regulon of yeast.

Authors:  S A Johnston; J M Salmeron; S S Dincher
Journal:  Cell       Date:  1987-07-03       Impact factor: 41.582

9.  S phase activation of the histone H2B promoter by OCA-S, a coactivator complex that contains GAPDH as a key component.

Authors:  Lei Zheng; Robert G Roeder; Yan Luo
Journal:  Cell       Date:  2003-07-25       Impact factor: 41.582

10.  Differential binding of NAD+ and NADH allows the transcriptional corepressor carboxyl-terminal binding protein to serve as a metabolic sensor.

Authors:  Clark C Fjeld; William T Birdsong; Richard H Goodman
Journal:  Proc Natl Acad Sci U S A       Date:  2003-07-18       Impact factor: 11.205

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  26 in total

1.  The Cyc8-Tup1 complex inhibits transcription primarily by masking the activation domain of the recruiting protein.

Authors:  Koon Ho Wong; Kevin Struhl
Journal:  Genes Dev       Date:  2011-12-01       Impact factor: 11.361

2.  Molecular simulation and docking studies of Gal1p and Gal3p proteins in the presence and absence of ligands ATP and galactose: implication for transcriptional activation of GAL genes.

Authors:  Sanjay K Upadhyay; Yellamraju U Sasidhar
Journal:  J Comput Aided Mol Des       Date:  2012-05-26       Impact factor: 3.686

3.  The Gal3p transducer of the GAL regulon interacts with the Gal80p repressor in its ligand-induced closed conformation.

Authors:  Tali Lavy; P Rajesh Kumar; Hongzhen He; Leemor Joshua-Tor
Journal:  Genes Dev       Date:  2012-02-01       Impact factor: 11.361

4.  The transcription repressor NmrA is subject to proteolysis by three Aspergillus nidulans proteases.

Authors:  Xiao Zhao; Samantha L Hume; Christopher Johnson; Paul Thompson; Junyong Huang; Joe Gray; Heather K Lamb; Alastair R Hawkins
Journal:  Protein Sci       Date:  2010-07       Impact factor: 6.725

5.  The interaction between an acidic transcriptional activator and its inhibitor. The molecular basis of Gal4p recognition by Gal80p.

Authors:  James B Thoden; Louise A Ryan; Richard J Reece; Hazel M Holden
Journal:  J Biol Chem       Date:  2008-08-13       Impact factor: 5.157

Review 6.  Rearrangements of the transcriptional regulatory networks of metabolic pathways in fungi.

Authors:  Hugo Lavoie; Hervé Hogues; Malcolm Whiteway
Journal:  Curr Opin Microbiol       Date:  2009-10-29       Impact factor: 7.934

Review 7.  Rewiring and regulation of cross-compartmentalized metabolism in protists.

Authors:  Michael L Ginger; Geoffrey I McFadden; Paul A M Michels
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-03-12       Impact factor: 6.237

Review 8.  Regulations of sugar transporters: insights from yeast.

Authors:  J Horák
Journal:  Curr Genet       Date:  2013-03-01       Impact factor: 3.886

9.  Different Mechanisms Confer Gradual Control and Memory at Nutrient- and Stress-Regulated Genes in Yeast.

Authors:  Alessandro Rienzo; Daniel Poveda-Huertes; Selcan Aydin; Nicolas E Buchler; Amparo Pascual-Ahuir; Markus Proft
Journal:  Mol Cell Biol       Date:  2015-08-17       Impact factor: 4.272

10.  Intracellular NADPH levels affect the oligomeric state of the glucose 6-phosphate dehydrogenase.

Authors:  Michele Saliola; Angela Tramonti; Claudio Lanini; Samantha Cialfi; Daniela De Biase; Claudio Falcone
Journal:  Eukaryot Cell       Date:  2012-10-12
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