Literature DB >> 18283608

Solid-phase synthesis of siRNA oligonucleotides.

Serge L Beaucage1.   

Abstract

Since the discovery of RNA interference (RNAi) as a means to silence the expression of specific genes, small interfering RNA (siRNA) oligonucleotides have been recognized as powerful tools for targeting therapeutically important mRNAs and eliciting their destruction. This discovery has created a high demand for synthetic oligoribonucleotides as potential therapeutics and has spurred a renaissance in the development of rapid, efficient methods for solid-phase RNA synthesis. The design and implementation of 2'-hydroxyl protecting groups that provide ribonucleoside phosphoramidites with coupling kinetics and coupling efficiencies comparable to those of deoxyribonucleoside phosphoramidites are key to the production of RNA oligonucleotides in sufficient quantity and purity for pharmaceutical applications. In this context, various siRNAs were chemically modified to identify the biophysical and biochemical parameters necessary for effective and stable RNAi-mediated gene-silencing activities.

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Year:  2008        PMID: 18283608

Source DB:  PubMed          Journal:  Curr Opin Drug Discov Devel        ISSN: 1367-6733


  19 in total

1.  Comprehensive evaluation of canonical versus Dicer-substrate siRNA in vitro and in vivo.

Authors:  Donald J Foster; Scott Barros; Rick Duncan; Sarfraz Shaikh; William Cantley; Amy Dell; Elena Bulgakova; Jonathan O'Shea; Nate Taneja; Satya Kuchimanchi; Christopher B Sherrill; Akin Akinc; Gregory Hinkle; Amy C Seila White; Bo Pang; Klaus Charisse; Rachel Meyers; Muthiah Manoharan; Sayda M Elbashir
Journal:  RNA       Date:  2012-01-31       Impact factor: 4.942

2.  New strategy for the synthesis of chemically modified RNA constructs exemplified by hairpin and hammerhead ribozymes.

Authors:  Afaf H El-Sagheer; Tom Brown
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-16       Impact factor: 11.205

3.  Single-nucleotide resolution of RNAs up to 59 nucleotides by high-performance liquid chromatography.

Authors:  Zhen Huang; Sabarinath Jayaseelan; Jeffrey Hebert; Hyojung Seo; Li Niu
Journal:  Anal Biochem       Date:  2012-12-27       Impact factor: 3.365

4.  Self-neutralizing oligonucleotides with enhanced cellular uptake.

Authors:  Ivan Yanachkov; Boris Zavizion; Valeri Metelev; Laura J Stevens; Yekaterina Tabatadze; Milka Yanachkova; George Wright; Anna M Krichevsky; David R Tabatadze
Journal:  Org Biomol Chem       Date:  2017-02-07       Impact factor: 3.876

5.  Efficient delivery of RNAi prodrugs containing reversible charge-neutralizing phosphotriester backbone modifications.

Authors:  Bryan R Meade; Khirud Gogoi; Alexander S Hamil; Caroline Palm-Apergi; Arjen van den Berg; Jonathan C Hagopian; Aaron D Springer; Akiko Eguchi; Apollo D Kacsinta; Connor F Dowdy; Asaf Presente; Peter Lönn; Manuel Kaulich; Naohisa Yoshioka; Edwige Gros; Xian-Shu Cui; Steven F Dowdy
Journal:  Nat Biotechnol       Date:  2014-11-17       Impact factor: 54.908

6.  RNA interference therapeutics targeting angiotensinogen ameliorate preeclamptic phenotype in rodent models.

Authors:  Nadine Haase; Donald J Foster; Mark W Cunningham; Julia Bercher; Tuyen Nguyen; Svetlana Shulga-Morskaya; Stuart Milstein; Sarfraz Shaikh; Jeff Rollins; Michaela Golic; Florian Herse; Kristin Kräker; Ivo Bendix; Meray Serdar; Hanna Napieczynska; Arnd Heuser; Alexandra Gellhaus; Kristin Thiele; Gerd Wallukat; Dominik N Müller; Babbette LaMarca; Ralf Dechend
Journal:  J Clin Invest       Date:  2020-06-01       Impact factor: 14.808

7.  Development of a Backbone Cyclic Peptide Library as Potential Antiparasitic Therapeutics Using Microwave Irradiation.

Authors:  Nir Qvit; Opher S Kornfeld
Journal:  J Vis Exp       Date:  2016-01-26       Impact factor: 1.355

8.  Enzymatic incorporation of emissive pyrimidine ribonucleotides.

Authors:  Seergazhi G Srivatsan; Yitzhak Tor
Journal:  Chem Asian J       Date:  2009-03-02

9.  Modulation of thermal stability can enhance the potency of siRNA.

Authors:  Haripriya Addepalli; Chang G Peng; Gang Wang; Yupeng Fan; Klaus Charisse; K Narayanannair Jayaprakash; Kallanthottathil G Rajeev; Rajendra K Pandey; Gary Lavine; Ligang Zhang; Kerstin Jahn-Hofmann; Philipp Hadwiger; Muthiah Manoharan; Martin A Maier
Journal:  Nucleic Acids Res       Date:  2010-07-07       Impact factor: 16.971

Review 10.  Computational approaches to predicting the impact of novel bases on RNA structure and stability.

Authors:  Jason G Harrison; Yvonne B Zheng; Peter A Beal; Dean J Tantillo
Journal:  ACS Chem Biol       Date:  2013-10-08       Impact factor: 5.100

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